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[bioontology-support] problem with rest service

Ray Fergerson ray.fergerson at stanford.edu
Fri Oct 4 10:58:54 PDT 2013


This is indeed broken. We will look into it.

 

Ray

 

From: bioontology-support-bounces at lists.stanford.edu
[mailto:bioontology-support-bounces at lists.stanford.edu] On Behalf Of Pat
Bacha
Sent: Wednesday, October 02, 2013 9:52 AM
To: support at bioontology.org
Subject: [bioontology-support] problem with rest service

 

I do not know if this is related in anyway with the changes that you have
been implementing or not but the previous rest service call that I was
using is now quitting immediately with the following error message (no way
has it timed out after 30 seconds)

' We are sorry but this call has timed out after 30 seconds. Some REST
calls can have their parameters set so that they take a very long time to
complete. A typical example is the view extraction call where the view to
be extracted is quite large. We have no workaround for this problem at the
moment.'


I have been trying with both the call for the older version of NCI
thesaursus branch that I am downloading and the current version as well
where  is my key value

http://rest.bioontology.org/bioportal/viewextractor/50373/?
<http://rest.bioontology.org/bioportal/viewextractor/50373/?&conceptid=C12
219&ontologyname=anatomy.owl&apikey=eea925a0-1234-46ed-999c-c0fdf0a87540>
&conceptid=C12219&ontologyname=anatomy.owl&apikey=eea925a0-1234-46ed-999c-
c0fdf0a87540
http://rest.bioontology.org/bioportal/viewextractor/50586/?
<http://rest.bioontology.org/bioportal/viewextractor/50586/?&conceptid=C12
219&ontologyname=anatomy.owl&apikey=eea925a0-1234-46ed-999c-c0fdf0a87540>
&conceptid=C12219&ontologyname=anatomy.owl&apikey=eea925a0-1234-46ed-999c-
c0fdf0a87540

Any help would be appreciated,
Pat Bach

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