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[bioontology-support] automatic download of an ontology

Paul R Alexander palexander at stanford.edu
Mon Oct 21 11:13:15 PDT 2013


Marek,

The new API has an equivalent endpoint documented at http://data.bioontology.org/documentation#Ontology

Basically, you would use:
http://data.bioontology.org/ontologies/VT/download

Paul


On Oct 21, 2013, at 11:09 AM, "Tutaj, Marek" <mtutaj at mcw.edu> wrote:

> Hello,
>  
> I am wondering how can I download the latest submission of an ontology? (I need that as part of our pipeline).
>  
> Using old API, the solution was very elegant: http://rest.bioontology.org/bioportal/virtual/download/1659?apikey=4ea81d74-8960-4525-810b-fa1baab576ff  But this URL is obsolete, according to the latest news.
>  
> Is there a way to download the ontology file, latest submission, by using BioPortal 4.0 services?
>  
> Thank you,
> Marek
>  
> Marek Tutaj
> Programmer/Analyst
> Rat Genome Database
> Human and Molecular Genetics Center
> Medical College of Wisconsin
> (P):  414-955-2227
>  
> _______________________________________________
> bioontology-support mailing list
> bioontology-support at lists.stanford.edu
> https://mailman.stanford.edu/mailman/listinfo/bioontology-support

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