Search Mailing List Archives


Limit search to: Subject & Body Subject Author
Sort by: Reverse Sort
Limit to: All This Week Last Week This Month Last Month
Select Date Range     through    

[bioontology-support] Problem with accessing RDF for the ontology instances.

Matthias Palmér matthias at metasolutions.se
Tue Sep 17 01:19:27 PDT 2013


Hi again,
(I wrote two mails since it was two different kinds of questions..)

I understand you are just about to change the infrastructure to a
triple-store, great!
Maybe this means that I only need to wait a week and everything will work
as expected, if so, just tell me to be patient. :-)
In any case I describe the practical problem I have:

I cannot get any RDF representation for the URIs I find. For example, using
content negotiation to get RDF/XML yields a server error back (status code
500 after three! redirects).


Using wget I get:
wget --header='accept:application/rdf+xml'
http://purl.bioontology.org/ontology/SNOMEDCT/123037004
--2013-09-17 09:29:06--
http://purl.bioontology.org/ontology/SNOMEDCT/123037004
Resolving purl.bioontology.org (purl.bioontology.org)... 171.67.213.41
Connecting to purl.bioontology.org (purl.bioontology.org)|171.67.213.41|:80...
connected.
HTTP request sent, awaiting response... 302 Moved Temporarily
Location: http://bioportal.bioontology.org/virtual/1353/123037004[following]
--2013-09-17 09:29:06--
http://bioportal.bioontology.org/virtual/1353/123037004
Resolving bioportal.bioontology.org (bioportal.bioontology.org)...
171.67.213.48
Connecting to bioportal.bioontology.org
(bioportal.bioontology.org)|171.67.213.48|:80...
connected.
HTTP request sent, awaiting response... 302
Location:
http://bioportal.bioontology.org/visualize/46896/?conceptid=123037004[following]
--2013-09-17 09:29:07--
http://bioportal.bioontology.org/visualize/46896/?conceptid=123037004
Connecting to bioportal.bioontology.org
(bioportal.bioontology.org)|171.67.213.48|:80...
connected.
HTTP request sent, awaiting response... 301
Location:
http://bioportal.bioontology.org/ontologies/46896?p=terms&conceptid=123037004[following]
--2013-09-17 09:29:07--
http://bioportal.bioontology.org/ontologies/46896?p=terms&conceptid=123037004
Connecting to bioportal.bioontology.org
(bioportal.bioontology.org)|171.67.213.48|:80...
connected.
HTTP request sent, awaiting response... 500
2013-09-17 09:30:08 ERROR 500: (no description).

Also, as you might expect I am a bit confused over why you respond with two
302 and then a 301 redirect before giving a response (in this case failing
to do so). I would have expected a single 303 redirect (see other).


Greetings,
Matthias Palmér
http://metasolutions.se
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mailman.stanford.edu/pipermail/bioontology-support/attachments/20130917/0b8f5125/attachment.html>


More information about the bioontology-support mailing list