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[bioontology-support] [BioPortal] Feedback from Devin Goodman

Devin Goodman dgoodman at glacieroncology.com
Mon Aug 4 14:12:12 PDT 2014


Thanks guys. I'll update our links just to be safe. Thanks again.

On Monday, August 4, 2014, Ray Fergerson <ray.fergerson at stanford.edu> wrote:

> I think that this is fixed now. Redirected the MSH purls to MESH
>
>
>
> *From:* bioontology-support [mailto:
> bioontology-support-bounces at lists.stanford.edu
> <javascript:_e(%7B%7D,'cvml','bioontology-support-bounces at lists.stanford.edu');>]
> *On Behalf Of *Paul R Alexander
> *Sent:* Monday, August 4, 2014 12:31 PM
> *To:* Devin Goodman
> *Cc:* support at bioontology.org
> <javascript:_e(%7B%7D,'cvml','support at bioontology.org');>
> *Subject:* Re: [bioontology-support] [BioPortal] Feedback from Devin
> Goodman
>
>
>
> Devin,
>
>
>
> Are these PURLs that you have stored somewhere? They have an invalid id in
> them. There was a bug that we fixed recently that was causing us to
> generate PURLs with MSH instead of MESH. However, we should have some
> redirect in place between MSH and MESH so we'll have to add that. In the
> meantime, replacing MSH with MESH should fix your problem.
>
>
>
> Paul
>
>
>
>
>
> On Aug 4, 2014, at 9:48 AM, Devin Goodman <dgoodman at glacieroncology.com
> <javascript:_e(%7B%7D,'cvml','dgoodman at glacieroncology.com');>> wrote:
>
>
>
> Hi Paul,
>
> I still seem to be getting error messages with the MESH ontology.  Two
> examples are: height <http://purl.bioontology.org/ontology/MSH/D001827> and
> blood pressure <http://purl.bioontology.org/ontology/MSH/D001794>.  Both
> return errors for me.
>
> Thanks for your help.
>
> Best, Devin
>
>
>
> On Wed, Jul 16, 2014 at 6:04 PM, Paul R Alexander <palexander at stanford.edu
> <javascript:_e(%7B%7D,'cvml','palexander at stanford.edu');>> wrote:
>
> Devin,
>
> The PURLs have been updated to use the appropriate id for the MESH
> ontology, so they should be working now. Please let us know if you continue
> to have problems.
>
>
> Paul
>
>
> On Jul 3, 2014, at 1:01 PM, support at bioontology.org
> <javascript:_e(%7B%7D,'cvml','support at bioontology.org');> wrote:
>
> >
>
> > Name: Devin Goodman
> >
> > Email: dgoodman at glacieroncology.com
> <javascript:_e(%7B%7D,'cvml','dgoodman at glacieroncology.com');>
> >
> > Location:
> >
> > Comment:
> > The reference links do not work.  For example: A search for Body Mass
> Index in the MESH database returns a URL of
> http://bioportal.bioontology.org/ontologies/MSH/D015992.  However, when
> you click on the link, it is broken.  The same is true for most links in
> this database.
> > Please advise.
> > Thank you.
> >
>
> > _______________________________________________
> > bioontology-support mailing list
> > bioontology-support at lists.stanford.edu
> <javascript:_e(%7B%7D,'cvml','bioontology-support at lists.stanford.edu');>
> > https://mailman.stanford.edu/mailman/listinfo/bioontology-support
> >
>
>
>
>
>


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