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[bioontology-support] BioPortal mappings

Rob Davidson rob at
Mon Jul 7 00:26:04 PDT 2014

Dear support,

I am interested in the BioPortal ontology data, especially how the
definitions are linked. The wiki mentions an API but the associated page
has apparently been removed as of Feb 2014.

Can you tell me if it is possible a) to download all the ontology data in
one step b) to access the mapping results either from the downloaded data
or via some API?

Many thanks for your time,

Rob Davidson

*Robert L Davidson PhD*
*t:* +852 60151009
*e:* rob at
*a:* GigaScience, BGI, 16 Dai Fu Street, Tai Po Industrial Estate, Tai Po,
New Territories, Hong Kong
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