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[bioontology-support] VA ontology delete error

Paul R Alexander palexander at stanford.edu
Tue Jul 8 17:11:59 PDT 2014


Thanks Vitaly, we’ll look into this.

Paul


On Jul 8, 2014, at 4:32 AM, Vitaly Zimukha <unknownnpc at gmail.com> wrote:

> Paul,
> 
> How it was fixed:
> 1. I commented lines 146-148 in the:
> /srv/ncbo/ontologies_api/current/vendor/bundle/ruby/2.0.0/bundler/gems/ontologies_linked_data-a351ba8999b2/lib/ontologies_linked_data/models/ontology.rb
> 
> <http://ncbo-support.2288202.n4.nabble.com/file/n4653155/delete1.png> 
> 
> lines #237-238 in the:
> /usr/local/rbenv/versions/2.0.0-p247/lib/ruby/gems/2.0.0/bundler/gems/goo-9e387b5224d7/lib/goo/base/settings/settings.rb
> 
> <http://ncbo-support.2288202.n4.nabble.com/file/n4653155/delete2.png> 
> 
> 2. In the ruby console:
> ontology = LinkedData::Models::Ontology.find("MEDDRA").first
> ontology.delete
> 3. Remove comments from step 1.
> 4. Upload MEDDRA ontology via web ui. 
> 
> Best Regards,
> Vitaly
> 
> 
> 
> --
> View this message in context: http://ncbo-support.2288202.n4.nabble.com/VA-ontology-delete-error-tp4653139p4653155.html
> Sent from the NCBO Support mailing list archive at Nabble.com.
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