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[bioontology-support] BioPortal Image at USC Columbia - Error Page

okeefe okeefe at cse.sc.edu
Tue Jul 15 08:28:04 PDT 2014


After running `bprestart`  I get the following warning messages:

Starting memcached: WARNING: Setting item max size above 1MB is not 
recommended!  Raising this limit increases th eminimum memory requirements 
and will decrease your memory efficiency.

Starting httpd:  httpd:  Could not reliably determine th eservers's fully 
qualified domain name, using localhost.localdomain for ServerName

Starting ncbo_cron: (LD) >> Using rdf store localhost:8081
(LD) >> Using search server at http://localhost:8080/solr/
(LD) >> Using HTTP Redis instance at localhost:6380
(LD) >> Using Goo Redis instance at localhost:6382
(AN) >> using ANN Redis instance at localhost:6381
Daemon has started successfully.

I wonder if the domainname is set properly?


>
> On Mon, 14 Jul 2014, baileelucas [via NCBO Support] wrote:
>
>> Hi,
>> 
>> My name is Bailee Lucas and I am working on a virtual image of bioportal at 
>> the Computer Science Department at USC,
>> Columbia, SC. This project is being administered under the guidance of the 
>> Department Chair, Dr.Michael Huhns and
>> Dr.Pat O'Keefe.
>> 
>> Our portal had been running smoothly, however, after a power outage, our 
>> site only comes up with an error page saying,
>> "We're sorry but something has gone wrong. We have been notified of this 
>> error." We have checked the server side of
>> things on our end and everything seems to be working there. We're thinking 
>> that it has something to do with the actual
>> portal files.
>> 
>> Here is a look at the errorLog:
>> [ 2014-07-14 03:32:41.0798 1499/7f8db94df700 Pool2/Implementation.cpp:1291 
>> ]: [App 1938 stdout]  @data=
>> [ 2014-07-14 03:32:41.0801 1499/7f8db94df700 Pool2/Implementation.cpp:1291 
>> ]: [App 1938 stdout] <MemCache: 1 servers,
>> ns: "BioPortal", ro: false>,
>> [ 2014-07-14 03:32:41.0802 1499/7f8db94df700 Pool2/Implementation.cpp:1291 
>> ]: [App 1938 stdout]  @middleware=
>> [ 2014-07-14 03:32:41.0812 1499/7f8db94df700 Pool2/Implementation.cpp:1291 
>> ]: [App 1938 stdout]
>> #<Class:0x007f790302cac8>,
>> [ 2014-07-14 03:32:41.0812 1499/7f8db94df700 Pool2/Implementation.cpp:1291 
>> ]: [App 1938 stdout]  @thread_local_key=
>> [ 2014-07-14 03:32:41.0814 1499/7f8db94df700 Pool2/Implementation.cpp:1291 
>> ]: [App 1938 stdout]
>> :active_support_cache_mem_cache_store_local_cache>
>> [ 2014-07-14 03:32:41.4863 1499/7f8db94df700 Pool2/Implementation.cpp:1291 
>> ]: [App 1938 stdout] REDOING REQUEST NO
>> CACHE ENTRY http://10.0.2.15:8082/ontologies?include=all&include_views=true
>> [ 2014-07-14 03:32:41.7582 1499/7f8db94df700 Pool2/Implementation.cpp:1291 
>> ]: [App 1938 stdout] REDOING REQUEST NO
>> CACHE ENTRY http://10.0.2.15:8082/ontologies?include=all&include_views=true
>> [ 2014-07-14 03:39:51.4886 1499/7f8db94df700 Pool2/Implementation.cpp:1291 
>> ]: [App 1938 stdout] REDOING REQUEST NO
>> CACHE ENTRY http://10.0.2.15:8082/ontologies?include=all
>> [ 2014-07-14 03:45:27.6418 1499/7f8db94df700 Pool2/Implementation.cpp:1291 
>> ]: [App 1938 stdout] REDOING REQUEST NO
>> CACHE ENTRY http://10.0.2.15:8082/ontologies?include=all
>> 
>> Any help would be greatly appreciated!
>> 
>> Bailee Lucas
>> 
>> _______________________________________________________________________________________________________________________
>> If you reply to this email, your message will be added to the discussion 
>> below:
>> http://ncbo-support.2288202.n4.nabble.com/BioPortal-Image-at-USC-Columbia-Error-Page-tp4653174.html
>> This email was sent by baileelucas (via Nabble)
>> To receive all replies by email, subscribe to this discussion
>> 
>> 
>
>

-- 
---
Pat
---

Pat O'Keefe        ★  Systems Manager
okeefe at cse.sc.edu  ★  Dept. of Computer Science & Engineering - Swearingen 1D28
+1 803 777-4611    ★  Univ. of South Carolina, Columbia, SC 29208



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