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[bioontology-support] uploading ontology
Alexander Garcia Castro
alexgarciac at gmail.com
Tue Jul 29 15:47:48 PDT 2014
Thanks, I will use the url instead. I will keep an eye on bioportal to see
the new version.
On Tue, Jul 29, 2014 at 5:28 PM, Paul R Alexander <palexander at stanford.edu>
> After getting your email off-list, I downloaded the ontology file and was
> able to upload it without a problem. I’m not sure why you had issues,
> though perhaps you hit a timeout. One thing you can do in the future is zip
> your file to reduce the file size, which will decrease the likelihood of a
> timeout occurring.
> An even better fix is to publish your ontology file to a URL. You can
> submit the URL to BIoPortal and we will watch the URL for changes. Any time
> the file is changed, we will download the new version and create a new
> submission for the ontology.
> For now, your new submission is available as version 4 and it will be
> processed by the system shortly.
> On Jul 29, 2014, at 2:27 PM, Alexander Garcia Castro <
> alexgarciac at gmail.com> wrote:
> I have uploaded a new version of my ontology and now I have just lost all
> I had. in bioportal, the url is
> if I click on the bioportal purl I get nothing (The page you are looking
> for wasn't found. Please try again". BTW I am getting the same error msg
> even when I am logged. Where is now my ontology? has my previous submission
> been deleted?
> Can someone please let me know if the new version of the ontology was
> uploaded? when will I be able to see the new version?
> Please let me know what am I doing wrong that every time I try to use
> bioportal for uploading a new ontology it is a nightmare.
> Alexander Garcia
> bioontology-support mailing list
> bioontology-support at lists.stanford.edu
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