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[bioontology-support] PURL for ASDPTO is incorrect

Trish Whetzel plwhetzel at gmail.com
Mon Jun 9 18:02:19 PDT 2014


Were only the PURLs for the specific ontologies I mentioned fixed or were
they ALL reviewed and updated as needed?

Trish



On Mon, Jun 9, 2014 at 5:55 PM, Ray Fergerson <ray.fergerson at stanford.edu>
wrote:

> These are all fixed now.
>
>
>
> There was a period of several months when the PURL generation was not
> happening correctly. This has been fixed for a while. Ontologies submitted
> in this time got messed up purl definitions. Also we changed some more
> obscure ontology acronyms about 9 months ago but forgot to update the purls…
>
>
>
> We are fixing them as they are reported.
>
>
>
> Ray
>
>
>
> *From:* Trish Whetzel [mailto:plwhetzel at gmail.com]
> *Sent:* Monday, June 9, 2014 4:23 PM
> *To:* Ray Fergerson; BioPortal User Support
> *Subject:* Re: [bioontology-support] PURL for ASDPTO is incorrect
>
>
>
> I thought this was a one-off issue, but it appears to be more wide spread.
> For example:
>
> - HAO http://purl.bioontology.org/ontology/HAO resolves to
> http://bioportal.bioontology.org/virtual/1362 which returns an error
> message even though the latest version of the ontology was parsed
> successfully
>
> - OGDI http://purl.bioontology.org/ontology/OGDI resolves to
> http://bioportal.bioontology.org/virtual/1020OGDI which returns an error
> message (this is the common 1020 automatic PURL generation error).
>
> There are more examples of each case, WHO-ART, NPO, RXNO, BP-METADATA, etc.
>
>
>
> Trish
>
>
>
>
>
> On Mon, Jun 9, 2014 at 3:39 PM, Trish Whetzel <plwhetzel at gmail.com> wrote:
>
> Thanks!
>
> Trish
>
>
>
> On Mon, Jun 9, 2014 at 3:24 PM, Ray Fergerson <ray.fergerson at stanford.edu>
> wrote:
>
> Fixed.
>
>
>
> Ray
>
>
>
> *From:* bioontology-support [mailto:
> bioontology-support-bounces at lists.stanford.edu] *On Behalf Of *Trish
> Whetzel
> *Sent:* Monday, June 9, 2014 1:17 PM
> *To:* BioPortal User Support
> *Cc:* Alexa_McCray at hms.harvard.edu
> *Subject:* [bioontology-support] PURL for ASDPTO is incorrect
>
>
>
> The PURL for ASDPTO is listed as:
> http://purl.bioontology.org/ontology/ASDPTO
>
> but resolves to:
> http://bioportal.bioontology.org/virtual/1020ASDPTO
>
> Trish
>
>
>
>
>
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