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[bioontology-support] Taxonomy not showing

Darren Weber dlweber at stanford.edu
Tue Mar 25 09:07:01 PDT 2014


Hi James,

Thanks for reporting this.  I can confirm that the UI is not displaying 
that hierarchy correctly.  It looks like the data is correct in the REST 
API, see the 'parents' entry in

http://data.bioontology.org/ontologies/EFO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FNCBITaxon_10088?include=all

I'll create a ticket to fix the UI display.

Take care,
Darren


On 3/25/14, 7:52 AM, James Malone wrote:
> Hi,
>
> A good chunk of the taxa is missing under organism, for instance Mus 
> which is def in the ontology as subclass of Eukaryota 
> <http://bioportal.bioontology.org/ontologies/EFO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FNCBITaxon_2759>
>
> http://bioportal.bioontology.org/ontologies/EFO/?p=classes&conceptid=http://purl.obolibrary.org/obo/NCBITaxon_10088&jump_to_nav=true
>
> seems to be found but I can’t visually see it under Eukaryota.
>
> Thanks,
>
> James
>
>
>> Blog: http://drjamesmalone.blogspot.co.uk/
> Twitter: https://twitter.com/jamesmalone
>
> European Bioinformatics Institute (EMBL-EBI)
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>
>
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