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[bioontology-support] mapping problems

Willy WOLFF willy.wolff at etu.unistra.fr
Thu Mar 27 13:10:35 PDT 2014


The list is not empty, but only containing my class.

The ontologie is http://bioportal.bioontology.org/ontologies/TESTONTO

And I would like to point gene class to another real class containing gene, like NCIT.
--
Willy WOLFF

On 27 Mar 2014, at 18:55, Ray Fergerson wrote:

> This is puzzling. I tried this yesterday before I emailed you and then
> again this morning after your response. It always works for me. Can you
> please try it again. When you click on the dropdown list are you really
> seeing an empty list? 
> 
> Ray
> 
> -----Original Message-----
> From: bioontology-support
> [mailto:bioontology-support-bounces at lists.stanford.edu] On Behalf Of Willy
> WOLFF
> Sent: Thursday, March 27, 2014 6:43 AM
> To: Ray Fergerson; support at bioontology.org
> Subject: Re: [bioontology-support] mapping problems
> 
> Thank you.
> 
> But I can't chose another ontologie.
> In the menu, in right pane off the we page, I can see only my ontologie,
> not all the other ontologie we can see in the ontologie browser.
> 
> Willy
> 
> On 03/27/2014 12:44 AM, Ray Fergerson wrote:
>> Sorry but this information is out of date. To create a mapping from 
>> class A in ontology X to class B in ontology Y, in the bioportal UI 
>> first open ontology X and navigate to class A. Then go to the mappings 
>> tab and press the "create mapping button". You need to be logged in to
> create a mapping.
>> 
>> 
>> Ray
>> 
>> -----Original Message-----
>> From: bioontology-support
>> [mailto:bioontology-support-bounces at lists.stanford.edu] On Behalf Of 
>> Willy WOLFF
>> Sent: Wednesday, March 26, 2014 10:10 AM
>> To: support at bioontology.org
>> Subject: [bioontology-support] mapping problems
>> 
>> Hello,
>> 
>> I try to add a manual mapping between a class of my ontologie to a 
>> class of another ontologie.
>> 
>> I search for doing this with
>> http://www.bioontology.org/wiki/index.php/BioPortal_Mappings.
>> But i don't really understand how to do it.
>> 
>> I use Protege 4.3, and add skos editor plugin.
>> But how can i create the right property (like altLabel or prefLabel) 
>> to point to the other ontologie i want?
>> 
>> Thanks,
>> Willy
>> _______________________________________________
>> bioontology-support mailing list
>> bioontology-support at lists.stanford.edu
>> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>> 
> _______________________________________________
> bioontology-support mailing list
> bioontology-support at lists.stanford.edu
> https://mailman.stanford.edu/mailman/listinfo/bioontology-support

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