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[bioontology-support] ECSO ontology visualization

Ray Fergerson rayferg at stanford.edu
Wed Aug 26 14:39:39 PDT 2015


Great. We have someone working on this. I expect that we will have a fix out in a week or so.

Ray

-----Original Message-----
From: Ben Leinfelder [mailto:leinfelder at nceas.ucsb.edu] 
Sent: Wednesday, August 26, 2015 9:11 AM
To: Ray Fergerson
Cc: support at bioontology.org; Margaret O'Brien
Subject: Re: [bioontology-support] ECSO ontology visualization

Hi Ray,
Indeed, making the ontology public allowed the visualization to render. We’ll want to switch back to private eventually, but I think this will be a decent stop-gap solution.
Thanks!
-ben

> On Aug 25, 2015, at 2:13 PM, Ray Fergerson <rayferg at stanford.edu> wrote:
> 
> Confirmed. I will look into this but, if I had to guess, it would be that there is a problem visualizing private ontologies.
> 
> Ray
> 
> -----Original Message-----
> From: bioontology-support 
> [mailto:bioontology-support-bounces at lists.stanford.edu] On Behalf Of 
> Ben Leinfelder
> Sent: Tuesday, August 25, 2015 12:13 PM
> To: support at bioontology.org
> Cc: Margaret O'Brien
> Subject: [bioontology-support] ECSO ontology visualization
> 
> Hello,
> We are trying to use the built in visualization features of Bioportal for the ECSO ontology [1] but do not see any nodes rendering when we navigate to the “Visualization” tab.
> Is there something we need to do to enable this feature, or can you help troubleshoot why our particular ontology is failing in this regard?
> 
> Other ontologies [2] render for us so I suspect it is something particular to our ECSO ontology.
> 
> Thank you,
> -ben
> 
> [1] http://bioportal.bioontology.org/ontologies/ECSO
> [2] 
> http://bioportal.bioontology.org/ontologies/SNOMEDCT/?p=classes&concep
> tid=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FSNOMEDCT%2F11626600
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