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[bioontology-support] [BioPortal] Feedback from Mark Williams

Jennifer Leigh Vendetti vendetti at stanford.edu
Thu Dec 3 16:43:01 PST 2015


Hello Mark,

Thanks for bringing this to our attention.  I think it may be a problem with the search index for this particular ontology.  I’m able to retrieve the “Bos taurus” class via the API [1], but querying for the same class via the search endpoint returns an empty collection [2].

I’ve entered a ticket in our issue tracker (NCBO-1591).  Our search expert is out of the office until Monday, so it might be a few days before this is fixed.  Apologies for the inconvenience.

Best,
Jennifer

[1] http://data.bioontology.org/ontologies/NCBITAXON/classes/http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FNCBITAXON%2F9913
[2] http://data.bioontology.org/search?q=Bos+taurus&ontologies=NCBITAXON&require_exact_match=true



On Dec 3, 2015, at 3:32 AM, support at bioontology.org<mailto:support at bioontology.org> wrote:


Name: Mark Williams

Email: mwilliam at ebi.ac.uk<mailto:mwilliam at ebi.ac.uk>

Location: http://bioportal.bioontology.org/ontologies/NCBITAXON?p=classes&conceptid=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FNCBITAXON%2F9903&jump_to_nav=true

Feedback:

Searching for Bos taurus in NCBITAXON draws a blank. However, term does exist, http://purl.bioontology.org/ontology/NCBITAXON/9913.

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