Search Mailing List Archives

Limit search to: Subject & Body Subject Author
Sort by: Reverse Sort
Limit to: All This Week Last Week This Month Last Month
Select Date Range     through    

[bioontology-support] BioPortal API semantic_types parameter

Ben Leinfelder leinfelder at
Thu Dec 10 09:51:16 PST 2015

I’m using the annotator endpoint of the BioPortal API and trying to limit the returned concepts to subclasses of a particular semantic type in our ontology. I’m getting a 404 when I include the “semantic_types” and “expand_semantic_types_hierarchy” parameters (works without them) and wonder what I might be doing wrong. Should the semantic_types parameter be expressed differently?

Thank you for any pointers,
Ben Leinfelder
NCEAS informatics team

curl -v ",definition&ontologies=ECSO&”

HTTP/1.1 404 Not Found
<?xml version="1.0" encoding="UTF-8"?>
    <errors>Unable to find semantic type information with notation</errors>

More information about the bioontology-support mailing list