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[bioontology-support] [Biosharing-contact-us] [BioPortal] Feedback from Allyson Lister

Allyson Lister ally at lurena.com
Tue Nov 17 12:28:26 PST 2015


Thanks Michael,

I was just drafting a reply to your earlier email when this one came in.
Yes, that is what I meant. Basically, the "Loading.." message and the
search box are unnecessary for those ontologies which are represented only
by a summary entry in BioPortal. Does that make more sense?

Thanks :) Allyson

On Tue, 17 Nov 2015 at 20:07 Michael Dorf <mdorf at stanford.edu> wrote:

> Hi Allyson,
>
> I've created an issue in our bug tracking system that will track this
> issue:
>
> https://jira.bmir.stanford.edu/browse/NCBO-1575
>
> I agree, the widget should not display the "Loading..." message for
> Summary-only ontologies. We'll let you know once we've had a chance to
> address it. Meanwhile, feel free to review the issue via the link above for
> any new updates to its status.
>
> Thanks!
>
> Michael Dorf
>
>
>
> On Nov 17, 2015, at 05:34, support at bioontology.org wrote:
>
> Name: Allyson Lister
>
> Email: biosharing-contact-us at lists.sourceforge.net
>
> Location: http://bioportal.bioontology.org/
>
>
> *Feedback:*
>
> We use the NCBO Tree widget on the BioSharing.org website to display the
> trees for those ontologies referenced in BioSharing which are also present
> in BioPortal.
>
> I've noticed that the tree widget still tries to display the hierarchy of
> terms even for those records which are summary only, e.g. the Crop Ontology
> (see https://biosharing.org/bsg-002695 for the BioSharing record and the
> widget behaviour, and https://bioportal.bioontology.org/ontologies/CO for
> your record). Could the widget perhaps simply display a short sentence
> stating that the particular ontology in question is only present as a
> summary within BioPortal please?
>
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