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[bioontology-support] Annotator missing some hierachy annotations

Clement Jonquet jonquet at
Mon Apr 11 11:50:27 PDT 2016



Just discover this bug working with Sandeep on using the Annotator with
semantic expansion (hierarchy): 


Annotate: "photoreceptor cells" in MESH with all ancestors.


You will get 8 annotations, including 7 ancestors. 

But it seems some path to roots are ignored.


For instance: Eye is not in the results. Whereas it is in the hierarchy.


It's like if the retinal neurons > retina > Eye > sense organ path to roots
was ignored.


I have done more testing yet to see if this is generalized (i.e., many path
to roots are ignored) 

I have check in our SIFR box, it seems the bug is not generalized.



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