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[bioontology-support] searching for synonyms (NCBO-1605)

sridevi polavaram spolavar at gmail.com
Tue Feb 16 18:38:37 PST 2016


Hi John,

Thanks for the update. See my response inline.


> On your end: Note that we support the namespace
> http://www.geneontology.org/formats/oboInOwl#, while you have been using
> the namespace http://www.geneontology.org/formats/oboInOWL#. (In your
> case OWL is all upper case; but we only support the camel-case Owl
> version.)  So you’ll need to fix that.
>
> On our end: We don’t curently support hasExactSynonym for OWL files, only
> for OBO files. We believe we can change our code to also
>

So, which oboInOwl property is supported currently? hasRelatedSynonym? or
something else?


> support OWL files, but due to functional and scalability testing, the
> change may take some time (order 1-2 months). (This change could even prove
> not viable, but I think that’s highly unlikely.) So we’ll make it a task,
> and let you know via the list when it’s implemented.
>

I'd appreciate that.

Thanks
Sridevi
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