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[bioontology-support] Fwd: Internal server error

Michael Dorf mdorf at stanford.edu
Thu Feb 25 16:22:44 PST 2016



Begin forwarded message:

From: Michael Dorf <mdorf at stanford.edu<mailto:mdorf at stanford.edu>>
Subject: Re: [bioontology-support] Internal server error
Date: February 25, 2016 at 16:21:01 PST
To: Steve Deharo <steve.x.deharo at gsk.com<mailto:steve.x.deharo at gsk.com>>

Hi Steve,

This issue should now be resolved. We've had intermittent outages on the site recently. We are still working on a permanent solution to these. Meanwhile, EFO should now be accessible and operational.

Thanks!

Michael


On Feb 25, 2016, at 04:02, Steve Deharo <steve.x.deharo at gsk.com<mailto:steve.x.deharo at gsk.com>> wrote:

Hello,

I am trying to download the mapping between MeSH and EFO. The following call returns an error:
http://data.bioontology.org/ontologies/EFO/classes/?apikey=<http://data.bioontology.org/ontologies/EFO/classes/?apikey=d072f18c-fcad-418e-8de2-913613bc8d05>[my_key_here]
This worked last month.

The error is “Internal Server Error”.

I have tried the following:
http://data.bioontology.org/ontologies/EFO/notes
http://data.bioontology.org/ontologies/EFO/classes
Both give the same error. However other links from http://data.bioontology.org/ontologies/EFO/ work eg:
http://data.bioontology.org/ontologies/EFO/properties"<http://data.bioontology.org/ontologies/EFO/properties>
http://data.bioontology.org/ontologies/EFO/views

According to http://bioportal.bioontology.org/mappings
2360 MeSH terms are mapped to EFO. The html table is accessible.

Could you please look into this?

Thanks,
Steve


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