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[bioontology-support] National Drug Data File

Larry Schmitt lschmitt at briosolutions.com
Fri Mar 25 11:45:44 PDT 2016


Just out of curiosity if we wanted to license the file is there any option
to do this?

On Fri, Mar 25, 2016 at 2:40 PM, Jennifer Leigh Vendetti <
vendetti at stanford.edu> wrote:

> Hi Larry,
>
> I owe you an apology as my initial response to you was incorrect.  Due to
> licensing restrictions, we are not allowed to provide downloads of any UMLS
> files - either via the BioPortal user interface, or the REST API.
>
> Apologies for the inconvenience.
>
> Jennifer
>
>
> On Mar 24, 2016, at 10:10 AM, Larry Schmitt <lschmitt at briosolutions.com>
> wrote:
>
> Jennifer,
>
> I am attempting to download the file in RDF format but I keep receiving an
> error.  Below is the URL I am using and the error that I am seeing.  Can
> you let me know if I am doing something wrong?
>
> *URL:*
>
> http://data.bioontology.org/ontologies/NDDF/download?apikey=eaee1278-a3d6-41fb-8f43-7e14f2085b44&download_format=rdf
>
> *Error*:
> {
>
>    - -
>    "errors": [
>       - "License restrictions on download for NDDF"
>    ],
>    - "status": 403
>
> }
>
> On Wed, Mar 23, 2016 at 5:46 PM, Jennifer Leigh Vendetti <
> vendetti at stanford.edu> wrote:
>
>> Hello Larry,
>>
>> I think the closest thing we could provide to what you’re looking for is
>> the ontology source file we use to display information about the NDDF
>> ontology in BioPortal.  The file is available (in RDF Turtle format) for
>> download via our REST API:
>>
>> http://data.bioontology.org/ontologies/NDDF/download
>>
>> Our REST API is documented here:
>>
>> http://data.bioontology.org/documentation
>>
>> To use the API, you need an API key which requires that you register for
>> an account on the BioPortal website (
>> http://bioportal.bioontology.org/accounts/new).  Once you’ve registered
>> for an account, your API key is displayed on your user account page.
>>
>> Hope that helps.
>>
>> Jennifer
>>
>>
>> On Mar 23, 2016, at 8:00 AM, Larry Schmitt <lschmitt at briosolutions.com>
>> wrote:
>>
>> Hello,
>>
>> I was wondering if you could help us.  We are looking for some National
>> Drug Codes that are currently not contained in the list handled by the FDA
>> or the available archived list.  After doing some searches we came across
>> your site which seems to contain a good portion of the NDCs that we are
>> missing.
>>
>> For example we were able to find the 62991115603 NDC in the National Drug
>> Data File portion of your portal (resulting link below).  I was wondering
>> if you would be able to provide us with a file containing information with
>> all the NDCs and Preferred Names in your system.
>>
>> Example Link with needed information:
>>
>> http://bioportal.bioontology.org/ontologies/NDDF?p=classes&conceptid=006807
>>
>>
>> Thank you for your time.
>>
>> Larry Schmitt
>> _______________________________________________
>> bioontology-support mailing list
>> bioontology-support at lists.stanford.edu
>> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>>
>>
>>
>
>
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