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[bioontology-support] Failed to parse PSI-MS CV in BioPortal VA

vincentguo gjw_0418 at
Mon May 16 23:57:10 PDT 2016

Dear BioPortal experts,

    I submitted PSI-MS Controlled Vocabulary (version: 3.86.2, downloaded
from HUPO official website: into
our BioPortal VA (version2.4) and got an import error.

    Then I replaced the imports with:

    I still got an import error as follows:
Message: Error Could not load imported ontology:
<> Cause: Problem parsing
Could not parse ontology.  Either a suitable parser could not be found, or
parsing failed.  See parser logs below for explanation.
The following parsers were tried:
1) org.semanticweb.owlapi.rdf.rdfxml.parser.RDFXMLParser at 28ad1e1b
2) org.semanticweb.owlapi.owlxml.parser.OWLXMLParser at 3ad41caa
org.semanticweb.owlapi.functional.parser.OWLFunctionalSyntaxOWLParser at 4b08044b
4) :
org.semanticweb.owlapi.formats.RioTurtleDocumentFormatFactory at 95fd655c
org.semanticweb.owlapi.manchestersyntax.parser.ManchesterOWLSyntaxOntologyParser at 58f4fab7
6) :
org.semanticweb.owlapi.formats.NQuadsDocumentFormatFactory at 6f9c39ad
7) :
org.semanticweb.owlapi.formats.TrigDocumentFormatFactory at 27e81c
8) :
org.semanticweb.owlapi.formats.NTriplesDocumentFormatFactory at 937ecd36
9) :
org.semanticweb.owlapi.formats.RDFJsonDocumentFormatFactory at cd748dc3
10) :
org.semanticweb.owlapi.formats.BinaryRDFDocumentFormatFactory at 3bf24493
11) :
org.semanticweb.owlapi.formats.RDFJsonLDDocumentFormatFactory at dcacc47d
12) :
org.semanticweb.owlapi.formats.N3DocumentFormatFactory at 9a5
13) :
org.semanticweb.owlapi.formats.RioRDFXMLDocumentFormatFactory at 69b9a3bc
14) org.semanticweb.owlapi.rdf.turtle.parser.TurtleOntologyParser at 32513f84
15) :
org.semanticweb.owlapi.formats.TrixDocumentFormatFactory at 27e82d
16) org.semanticweb.owlapi.oboformat.OBOFormatOWLAPIParser at 77b6981b
17) org.semanticweb.owlapi.krss2.parser.KRSS2OWLParser at 6b208eb7
18) :
org.semanticweb.owlapi.formats.RDFaDocumentFormatFactory at 264e8d

    Could you please give me some advice on how to solve this problem?

/With best regards,/

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