Search Mailing List Archives

Limit search to: Subject & Body Subject Author
Sort by: Reverse Sort
Limit to: All This Week Last Week This Month Last Month
Select Date Range     through    

[bioontology-support] Error Deleting an ontology

Michael Dorf mdorf at
Thu Oct 6 15:35:17 PDT 2016

Hi Guadalupe,

Thank you for contacting us. You need to run ncbo_cron in a console mode before you can invoke the API calls. Here is the command you need to run to get into the console:

[root at localhost ncbo_cron]# ./bin/ncbo_cron --console

You should get the following prompt:

(LD) >> Using rdf store localhost:8080
(LD) >> Using search server at http://localhost:8385/solr/core1
(LD) >> Using HTTP Redis instance at localhost:6333
(LD) >> Using Goo Redis instance at localhost:6334
(AN) >> Using ANN Redis instance at localhost:6335
(CR) >> Using Redis instance at localhost:6345
Starting ncbo_cron service...
Running ncbo_cron with redis: #<Redis client v3.3.1 for redis://ncboprod-redis1:6379/0>
[1] pry(main)>

Then, you can run your commands to delete the ontology.

Good luck!


On Oct 6, 2016, at 15:26, Guadalupe Candia Zavaleta <gcandia at<mailto:gcandia at>> wrote:


I am trying to remove an ontology and marks a syntax error.
You could help me find the error?. Annex an image of the error.

Thanks in advance for your attention

<eliminar ontologia.jpg>
[cid:A8111672-E905-408F-AA38-E6A5E866B3CA at]
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: eliminar ontologia.jpeg
Type: image/jpeg
Size: 46158 bytes
Desc: eliminar ontologia.jpeg
URL: <>

More information about the bioontology-support mailing list