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[bioontology-support] Missing metrics in HORD ontology

Laia Subirats laia.subirats at gmail.com
Sun Aug 6 22:21:23 PDT 2017


Hi John,

I changed the references and now there is not a parsing problem anymore.
However, the metrics do not appear.

Cheers,

Laia Subirats
On Mon, Aug 7, 2017 at 1:40 AM, John Graybeal <jgraybeal at stanford.edu>
wrote:

> Hi Laia,
>
> Sorry for the trouble you are having.  Usually that message indicates
> there has been a problem parsing the ontology, and you can try verifying
> the ontology parses with Protege or WebProtege as a next step.
>
> In this case, a quick look at the error log indicated two issues:
> * "OWL_IMPORT_MISSING: http://who.int/icf"
> * "OWL_IMPORT_MISSING: http://www.orpha.net/version2.4"
>
> A quick suggestion (sorry, no time today to verify myself) is to check to
> confirm that those two ontologies are indeed at those locations, and if
> they are not, change the references in the source ontology to point to
> correct locations.
>
> If you are still having trouble after that, please send another note
> indicating your latest understanding, and our team will try to help. Thanks.
>
> John
>
>
> On Aug 5, 2017, at 9:52 PM, Laia Subirats <laia.subirats at gmail.com> wrote:
>
> Dear Sir/Madam,
>
> I would like to see the metrics of my ontology in
> http://bioportal.bioontology.org/ontologies/HORD
> <http://bioportal.bioontology.org/ontologies/PMR>, I do not know if there
> is any problem. I see that there is a "(Uploaded, Error Rdf)" but I do
> not see the problem.
>
> Yours faithfully,
> --
> Laia Subirats
> _______________________________________________
> bioontology-support mailing list
> bioontology-support at lists.stanford.edu
> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>
>
> ========================
> John Graybeal
> Technical Program Manager
> Center for Expanded Data Annotation and Retrieval /+/ NCBO BioPortal
> Stanford Center for Biomedical Informatics Research
>



-- 
Laia Subirats
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