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[bioontology-support] [BioPortal] Feedback from Chao-Kung Chen
Jennifer Leigh Vendetti
vendetti at stanford.edu
Mon Feb 13 10:18:35 PST 2017
On Feb 13, 2017, at 7:59 AM, support at bioontology.org<mailto:support at bioontology.org> wrote:
Name: Chao-Kung Chen
Email: ckchen at ebi.ac.uk<mailto:ckchen at ebi.ac.uk>
Dear support desk:
Our group from the European bioinformatics institute is trying to map MESH terms to mammalian phenotype ontology.
It is exciting to find that BioPortal has already done lots of stuff on this kind of mapping.
I wonder if there is a flatfile that users can download?
Currently we don’t make mappings available as a flat file download. You can read about the reason for this in a previous post on our support list:
You can however, retrieve all mappings between the MESH and MP ontologies via our REST API, e.g.:
The results default to JSON format. If you want XML, you can use the “format" query string parameter. Our REST API is documented here:
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