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[bioontology-support] Help with bioontology virtual machine

Chaitanya Churi chaitanya at
Tue Nov 7 12:00:27 PST 2017

I’m working with the virtual machine installation of the bioontology portal (specifically the third Release Candidate (Version 2.5 Release Candidate 3)). 

I’m querying the annotator endpoint and I’m having trouble with the output. 

If I query the regular bioportal api at <>, I get the output I care about with all the annotations, but if I query my local instance like so
with the same exact API call, I get back only a list of semantic types and no annotations. Is the output format for this version different? Is there updated documentation for this?

Appreciate your help.



Dr. Chaitanya Churi
Senior Data Scientist
chaitanya at <mailto:chaitanya at> <>
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