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[bioontology-support] while trying to make an update: "We're sorry but something has gone wrong. We have been notified of this error."

Jennifer Leigh Vendetti vendetti at
Tue Oct 17 07:02:25 PDT 2017

Hello Egon,

Apologies that you’re having difficulties updating WIKIPATHWAYS. BioPortal did experience some brief downtime yesterday, but not today that I’m aware of. Are you able to send me the ontology file that you’re attempting to submit (vendetti at Or, alternatively, if you’re entering a URL in the “Load from URL” field of the submission form, please send the URL. I’ll try to reproduce the error here so that I can troubleshoot.

Kind regards,

> On Oct 17, 2017, at 4:29 AM, Egon Willighagen <egon.willighagen at> wrote:
> Dear support desk,
> while trying to update an ontology I got a "We're sorry but something
> has gone wrong. We have been notified of this error." message. I tried
> this yesterday and again today.
> Can you assist me? Is the service unavailable at this moment, or is
> there something wrong with the information I am trying to upload? I'm
> trying to update the WIKIPATHWAYS ontology, and the input is a Turtle
> file, containing an OWL ontology. Is that supposed to work, or do I
> need to convert it to a RDF/XML serialization, perhaps?
> Your support would be most welcome,
> with kind regards,
> Egon
> -- 
> E.L. Willighagen
> Department of Bioinformatics - BiGCaT
> Maastricht University (
> Homepage:
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> ORCID: 0000-0001-7542-0286
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