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[bioontology-support] [BioPortal] Feedback from chen.yang at ugent.be

Chen Yang Chen.Yang at UGent.be
Fri Aug 10 01:28:58 PDT 2018


Thank you Jennifer and John!
That’s quite helpful! As a beginner, I am really sure I would have other questions in the future :-P
So… looking forward to the next talk :-P
Have a good day!
Chen

From: Jennifer Leigh Vendetti [mailto:vendetti at stanford.edu]
Sent: 10 August 2018 00:26
To: support at bioontology.org
Cc: Chen Yang <Chen.Yang at UGent.be>
Subject: Re: [bioontology-support] [BioPortal] Feedback from chen.yang at ugent.be

Hello Chen,

The target class search is blocked due to a mixed content error. Until we’re able to deploy a fix to our production environment, you should be able to use a workaround of modifying the protocol in the address bar of your browser from HTTPS to HTTP, i.e.:

http://bioportal.bioontology.org/ontologies/ONE?p=classes&conceptid=http%3A%2F%2Fncicb.nci.nih.gov%2Fxml%2Fowl%2FEVS%2FThesaurus.owl%23C25409<https://bioportal.bioontology.org/ontologies/ONE?p=classes&conceptid=http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C25409>

Jennifer



On Aug 9, 2018, at 12:07 PM, John Graybeal <jgraybeal at stanford.edu<mailto:jgraybeal at stanford.edu>> wrote:

Chen,

Your ontology has been deleted (thanks Jennifer!), and we have confirmed your problem with creating a new mapping and written up a ticket on it (https://github.com/ncbo/bioportal-project/issues/85). I am not sure how quick/easy this will be to solve, but we will have a look to see.

Thanks for your input,

John


On Aug 9, 2018, at 2:07 AM, support at bioontology.org<mailto:support at bioontology.org> wrote:

Name: chen.yang at ugent.be<mailto:chen.yang at ugent.be>
Email: chen.yang at ugent.be<mailto:chen.yang at ugent.be>
Location: https%3A%2F%2Fbioportal.bioontology.org<http://2fbioportal.bioontology.org/>%2Fontologies%2FONE%3Fp%3Dclasses%26conceptid%3Dhttp%253A%252F%252Fncicb.nci.nih.gov<http://252fncicb.nci.nih.gov/>%252Fxml%252Fowl%252FEVS%252FThesaurus.owl%2523C25409

Feedback:
Dear,
Could you please delete the ontology view "Nutritional Epidemiological STandard" (acronym: NEGO) created by me?
Meanwhile, for classes, when I click "class mappings" --> create new mapping --> target ontology or view --> target class, target class doesn't appear. I waited for 2 hours, it still didn't work.
Could you help me? Thanks in advance.
Best, Chen

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========================
John Graybeal
Technical Program Manager
Center for Expanded Data Annotation and Retrieval /+/ NCBO BioPortal
Stanford Center for Biomedical Informatics Research
650-736-1632

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