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[bioontology-support] [BioPortal] Feedback from chen.yang at

Michael Dorf mdorf at
Mon Aug 20 15:45:21 PDT 2018

Hi Chen,

Thanks for contacting us. I’ve looked at your ontology, and it did fail to process in BioPortal. It seems that the underlying issue is:

Caused by: org.semanticweb.owlapi.rdf.rdfxml.renderer.IllegalElementNameException: Illegal Element Name (Element Is Not A QName):

I’ve created an issue in our Github tracker that details our progress on working to resolve it:

There is a similar issue in our system with an identical error, but I haven’t found the exact solution in the tracker history.

I need to consult on this further with my colleagues, one of which, unfortunately, is on vacation until August 30th. I’ll try to keep you posted on what further I find out.



Michael Dorf
Chief Software Architect
The National Center for Biomedical Ontology
Stanford Biomedical Informatics Research
mdorf at<mailto:mdorf at>
O: 650-723-0357
M: 650-995-4374

On Aug 20, 2018, at 3:13 AM, support at<mailto:support at> wrote:

Name: chen.yang at<mailto:chen.yang at>

Email: chen.yang at<mailto:chen.yang at>



I submitted the newest version of NEST ontology. I tested it before uploading, no error was detected. However, it is marked as error rdf in BioPortal.

bioontology-support mailing list
bioontology-support at<mailto:bioontology-support at>

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