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[bioontology-support] programmatic class mappings

Wynne, Robert (NIH/NCI) [C] wynner at
Thu Aug 30 06:55:11 PDT 2018


There isn't a link to your OWL, but rdfs:label is usually the standard annotation to map across.  Many OWL files make use of it, and most well-known editors sometimes require it.

This all depends on what kind of imports and prefixes you're making use of.

Others could probably answer your other question better.  I'm just a bioportal user.


From: Filice, Ross W <Ross.W.Filice at>
Sent: Tuesday, August 28, 2018 3:02 PM
To: bioontology-support at
Subject: [bioontology-support] programmatic class mappings

Hi - in an OWL submission what is the appropriate property to map classes across ontologies? I've tried owl sameAs but I don't know that it's working. Should we be using skos:exactMatch instead? Or other?

And similarly is there a way to map subclasses across ontologies?

Thanks much,

  Ross W. Filice, M.D.
  Associate Professor and Chief, Imaging Informatics
  Department of Radiology, MedStar Georgetown University Hospital
  Chief, Imaging Informatics
  MedStar Medical Group Radiology
  Clinical Informatics Scientist
  National Center for Human Factors in Healthcare, MedStar Institute for Innovation

  3800 Reservoir Road NW, CG 201
  Washington DC, 20007
  202-444-3450<tel:202-444-3450> PHONE
  202-444-4899<tel:202-444-4899> FAX
  ross.w.filice at<mailto:ross.w.filice at>

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