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[bioontology-support] Ontology mapping

Jennifer Leigh Vendetti vendetti at stanford.edu
Mon Jul 9 09:38:57 PDT 2018


Hello Tatsuya,


On Jul 8, 2018, at 4:40 PM, Tatsuya Kushida <kushida at biosciencedbc.jp<mailto:kushida at biosciencedbc.jp>> wrote:

Dear BioPortal staffs,

I'm a developer of IOBC (http://purl.bioontology.org/ontology/IOBC).
Can I ask you a question? How can I do mapping my ontology terms to
other ontology ones?


Mappings are automatically generated when you submit an ontology to BioPortal. You can also manually create mappings using our REST API:

http://data.bioontology.org/documentation#Mapping

We have example code for programmatically creating mappings in our GitHub sample code repository:

https://github.com/ncbo/ncbo_rest_sample_code/blob/master/java/src/CreateMapping.java



I worry that my ontology mapping fully has not
been done yet (https://bioportal.bioontology.org/ontologies/IOBC/?p=mappings).


If you let us know what you think is missing, we could perhaps better comment on this point.

Kind regards,
Jennifer


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