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[bioontology-support] Problem with ontology parsing

Jennifer Leigh Vendetti vendetti at stanford.edu
Thu May 3 15:41:38 PDT 2018


OK - thanks for the reply Jean. The first 9 submission that didn’t parse have been deleted from the system.

Kind regards,
Jennifer


On May 3, 2018, at 12:40 PM, Charlet Jean <jean.charlet at upmc.fr<mailto:jean.charlet at upmc.fr>> wrote:

Hello Jennifer,

Yes, after I will upload a real new version.

Thank you.

Regards,
Jean.

Le 3 mai 2018 à 20:55, Jennifer Leigh Vendetti <vendetti at stanford.edu<mailto:vendetti at stanford.edu>> a écrit :

Hello Jean,

We had some issues with BioPortal from roughly 6 to 8:45AM PST. It looks like your new submission was uploaded around that time, and failed to parse as a result. I reprocessed the submission and your ontology is parsed / available in BioPortal now.

I assume you’d like us to delete the previous 9 submissions, none of which parsed due to the prefLabel you mentioned below?

Kind regards,
Jennifer



On May 3, 2018, at 8:35 AM, Charlet Jean <jean.charlet at upmc.fr<mailto:jean.charlet at upmc.fr>> wrote:

Hi Jennifer,

1. Good news, Clément found the problem with my ontology: the definition of a « fr-parlé » lang for prefLabel(s)
           (in <skos:prefLabel xml:lang="fr-parlé">besoin big-big</skos:prefLabel>)
2. Bad news, I upload a new version of an extract of my ontology in Bioportal in order to verify the good news number one and… it fails (attached screen copy) :-))

I imagine that you will easily correct the second problem…

Regards,
Jean.


<Capture d’écran 2018-05-03 à 16.04.58.png>



          ,,,,
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     Jean Charlet                          Mél : Jean.Charlet at upmc.fr<mailto:Jean.Charlet at upmc.fr>
   INSERM UMR_S 1142                        Tél : +33/0 1 44 27 91 09
15, rue de l'École de Médecine              URL : http://www.limics.fr/
 75006 Paris, France
                Assistance publique - Hôpitaux de Paris
              LIMICS - Univ. Paris VI - Univ. Paris XIII
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