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[bioontology-support] Bio Portal down

Andrew Massengale amassengale at rsna.org
Fri May 4 06:48:10 PDT 2018


Thanks Jennifer!

It appears to be up now.

Andrew M

From: Jennifer Leigh Vendetti <vendetti at stanford.edu>
Date: Thursday, May 3, 2018 at 1:08 PM
To: Andrew Massengale <amassengale at rsna.org>
Cc: "bioontology-support at lists.stanford.edu" <bioontology-support at lists.stanford.edu>
Subject: Re: [bioontology-support] Bio Portal down

Hello Andrew,

We had some issues with the site / REST API between 6 and 8:45am PST. Everything is back up - please let us know if you’re still experiencing issues.

Kind regards,
Jennifer




On May 3, 2018, at 6:57 AM, Andrew Massengale <amassengale at rsna.org<mailto:amassengale at rsna.org>> wrote:

Hi all,

I am a software engineer for RSNA. We are integrating with bio portal for one of our applications, and it appears that bio portal is currently down. Below are some screenshots of errors we are getting:

https://data.bioontology.org/search?ontology=RADLEX&apikey=58bb5724-cad7-45ed-a949-5570fa89a01e&q=cecum&format=json&subtree_root_id=http:%2F%2Fwww.radlex.org%2FRID%2F%23RID3&roots_only=true&page=1&pagesize=1000<https://na01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fdata.bioontology.org%2Fsearch%3Fontology%3DRADLEX%26apikey%3D58bb5724-cad7-45ed-a949-5570fa89a01e%26q%3Dcecum%26format%3Djson%26subtree_root_id%3Dhttp%3A%252F%252Fwww.radlex.org%252FRID%252F%2523RID3%26roots_only%3Dtrue%26page%3D1%26pagesize%3D1000&data=02%7C01%7Camassengale%40rsna.org%7C72482e1e67574b23863408d5b120e08a%7Cfb5fefcd7ca642f3b443917c2a68cecd%7C1%7C0%7C636609677129889794&sdata=MWGncJ4EFVTVI7QzJBpph0uOrhOiOPLAHm32cpu50HY%3D&reserved=0>
<image001.png>

Trying to select the “RADLEX” ontology in the “Find an ontology” search box on BioPortal’s main site (it has been “Loading Ontology…” for about 20 minutes now)
<image002.png>

If you could give me an estimate for how long this will take to fix, that would be great.

Thanks!

Andrew M

Andrew Massengale
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