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[bioontology-support] Download Ontologies Mappings

Sarah Alghamdi sarah.alghamdi.1 at kaust.edu.sa
Sat Oct 13 01:17:24 PDT 2018


Thank you for your response.
I have a question, is the mappings directed?
while downloaded I had the assumption they are not, and I just want to make
sure before proceeding in my work,
in other words if I have mappings from ontology1 to ontology2 it is the
same as the mappings from ontology2 to ontology1



On Fri, Oct 5, 2018 at 12:19 AM Michael Dorf <mdorf at stanford.edu> wrote:

> Hi Sarah,
>
> Unfortunately, at this point, the answer is NO. We've had similar requests
> in the past and have an existing open ticket in Github that tracks this
> issue:
>
> https://github.com/ncbo/bioportal-project/issues/84
>
> We are a small team, and our development schedule is highly selective.
> Unfortunately, this issue hasn’t yet made it to the top of our priority
> list.
>
> Sorry, I couldn’t be of more help.
>
> Michael
>
>
> On Oct 4, 2018, at 3:13 AM, Sarah Alghamdi <sarah.alghamdi.1 at kaust.edu.sa>
> wrote:
>
> Dear team,
> I hope this finds you very well,
> For my research I want to acquire all the mappings available between pairs
> of ontologies from the Bioportal, I'm currently using the REST API and
> passing by all the pairs of ontologies, but this is taking me very long
> time (might spend months).
> would it be possible for you to provide all the mappings in a single
> download link?
>
> --
> Best Regards,
>
> Sarah M. Alghamdi
> Computer Science PhD Student - KAUST
> Bio-Ontology Research Group (BORG)
> <https://borg.kaust.edu.sa/Pages/Home.aspx>
> Computational Bioscience Research Center (CBRC)
> <http://www.cbrc.kaust.edu.sa/>
> Computer, Electrical, and Mathematical Sciences and Engineering (CEMSE)
> <https://cemse.kaust.edu.sa/Pages/Home.aspx>
>
>
>
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-- 
Best Regards,

Sarah M. Alghamdi
Computer Science PhD Student - KAUST

Bio-Ontology Research Group (BORG)​
<https://borg.kaust.edu.sa/Pages/Home.aspx>

Computational Bioscience Research Center (CBRC)
<http://www.cbrc.kaust.edu.sa/>
Computer, Electrical, and Mathematical Sciences and Engineering (CEMSE)​
<https://cemse.kaust.edu.sa/Pages/Home.aspx>

-- 

This message and its contents, including attachments are intended solely 
for the original recipient. If you are not the intended recipient or have 
received this message in error, please notify me immediately and delete 
this message from your computer system. Any unauthorized use or 
distribution is prohibited. Please consider the environment before printing 
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