Search Mailing List Archives

Limit search to: Subject & Body Subject Author
Sort by: Reverse Sort
Limit to: All This Week Last Week This Month Last Month
Select Date Range     through    

[bioontology-support] MI update on Bioportal?

John Zobolas john.zobolas at
Fri Feb 8 03:57:15 PST 2019


The issue is that the MI ontology in the OBOfoundry page<> is updated but the BioPortal version?<> in not synced yet to the current/newest version. Could you please update it?

BR, John
From: Pablo Porras Millan <pporras at>
Sent: Friday, February 8, 2019 12:41 PM
To: Vasundra Touré; Sandra Orchard (orchard at
Cc: John Zobolas
Subject: Re: MI update on Bioportal?

Dear Vasundra,

I have no idea how BioPortal gets updated, but our reference github repo
is up to date and shows the latest version of the CV in OLS:
Our OBOfoundry page also seems tobe up to date

We have never updated BioPortal manually and I am certainly not willing
to start now, so I assume they have some sort of procedure to do these
updates. Can you use an alternative source for theCV?



On 08/02/2019 08:28, Vasundra Touré wrote:
> Dear Pablo and Sandra,
> I have looked at the MI terms in Bioportal and it seems like they are
> not updated. (see Causal Regulatory Mechanism branch
> Isn't it suppose to be an automatic update from Bioportal? Or do you
> have to submit the changes from your side?
> Just wanted to point out this issue.
> Thanks!
> Best regards,
> Vasundra

Pablo Porras Millán, Ph.D.
Molecular Interactions Team Coordinator
European Molecular Biology Laboratory
European Bioinformatics Institute (EMBL-EBI)
Wellcome Genome Campus
Cambridge CB10 1SD
United Kingdom
Tel:    +44 1223 494482
email:  pporras at

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <>

More information about the bioontology-support mailing list