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[bioontology-support] metadata treeview error message
Pan, Huaqin (Helen)
hpan at rti.org
Thu Mar 14 05:16:14 PDT 2019
Thanks, John! I will send questions to protege-user at lists.stanford.edu<mailto:protege-user at lists.stanford.edu> moving forward.
From: John Graybeal <jgraybeal at stanford.edu>
Sent: Thursday, March 14, 2019 2:10 AM
To: Pan, Huaqin (Helen) <hpan at rti.org>
Cc: support at bioontology.org; Pan, Huaqin (Helen) <hpan at rti.org>
Subject: Re: [bioontology-support] metadata treeview error message
EXTERNAL: This email originated from outside of the organization. Do not click links or open attachments unless you recognize the sender and know the content is safe.
This kind of question about ontologies should be sent to the Protege mail list, protege-user at lists.stanford.edu<mailto:protege-user at lists.stanford.edu>. The people on that list should be able to help you.
From: Pan, Huaqin (Helen) <hpan at rti.org<mailto:hpan at rti.org>>
Sent: Wednesday, March 13, 2019 20:40
To: John Graybeal
Cc: support at bioontology.org<mailto:support at bioontology.org>; Pan, Huaqin (Helen)
Subject: [bioontology-support] metadata treeview error message
I got an error message "The prefix "metadata" for element "metadata:treeView" is not bound" when I load the .xrdf file in Protege. I attached the code. Would you please help me figure out the issue?
Thank you for your help!
From: John Graybeal <jgraybeal at stanford.edu<mailto:jgraybeal at stanford.edu>>
Sent: Saturday, March 24, 2018 5:51 PM
To: Pan, Huaqin (Helen) <hpan at rti.org<mailto:hpan at rti.org>>
Cc: support at bioontology.org<mailto:support at bioontology.org>
Subject: Re: [bioontology-support] problem with ontology submission - please help!
I have submitted your OWL file under the LUNGMAP-HUMAN1 acronym, and got the results below . I did not get any error messages.
Note that you probably will want to redo your submission under the same acronym but leaving off the '1'. Once that is successful, we can delete this ontology.
I am wondering when you attempted your submissions. If you submitted it before late Thursday, we were having problems with the system up until that point, and these were likely interfering with your efforts.
When you try to submit under LUNGMAP-HUMAN, please keep track of the Add Submission process as you go, and let us know if there are any issues.
 Results of submission:
Thank you for submitting your ontology to BioPortal.
We will now put your ontology in the queue to be processed. Please keep in mind that it may take up to several hours before BioPortal users will be able to explore and search your ontology.
When your ontology is ready for viewing, it will be available here:
If you have any questions or problems, please email the BioPortal support team at support at bioontology.org<mailto:support at bioontology.org>
On Mar 24, 2018, at 7:38 PM, Pan, Huaqin (Helen) <hpan at rti.org<mailto:hpan at rti.org>> wrote:
Hello, I tried several times to submit an ontology:
initial submission always got
Another try always got
It repeats that when I tried different name/acronyms on different web browsers.
Would you please help me create the ontology?
Name: Anatomic Ontology for Alveolar Development and Maturation in the Mouse Lung
Owl is attached.
bioontology-support mailing list
bioontology-support at lists.stanford.edu<mailto:bioontology-support at lists.stanford.edu>
Technical Program Manager
Center for Expanded Data Annotation and Retrieval /+/ NCBO BioPortal
Stanford Center for Biomedical Informatics Research
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