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[bioontology-support] [BioPortal] Feedback from Richard Scheuermann

Scheuermann, Richard RScheuermann at jcvi.org
Fri Mar 15 16:06:00 PDT 2019


Thanks Jennifer.  Perhaps we need to change the annotation so that it is labeled as an ontology instead of an ontology view.  Is that simple to do?

Richard


--------------------------------------------
Richard H. Scheuermann, Ph.D.
Director, La Jolla Campus
J. Craig Venter Institute
4120 Capricorn Ln.
La Jolla, CA 92037
www.jcvi.org<http://www.jcvi.org>

rscheuermann at jcvi.org<mailto:rscheuermann at jcvi.org>
858-200-1876


From: Jennifer Leigh Vendetti <vendetti at stanford.edu>
Date: Friday, March 15, 2019 at 3:40 PM
To: "support at bioontology.org" <support at bioontology.org>
Cc: "Richard H. Scheuermann" <RScheuermann at jcvi.org>
Subject: Re: [bioontology-support] [BioPortal] Feedback from Richard Scheuermann

Hi Richard,

The “Find an ontology” search box on the home page only searches ontologies, not views of ontologies. It appears that PCL was declared as a view of the CL ontology.

Alternatively, you can use the Ontology Browse page to find PCL by ticking the “Ontology View” entry type on the left-hand side.

Kind regards,
Jennifer


[cid:6A67264B-7A1D-4EDE-9BAF-878164F4662C at stanford.edu]




On Mar 14, 2019, at 12:46 PM, support at bioontology.org<mailto:support at bioontology.org> wrote:

Name: Richard Scheuermann
Email: rscheuermann at jcvi.org<mailto:rscheuermann at jcvi.org>
Location: https%3A%2F%2Fbioportal.bioontology.org<http://2Fbioportal.bioontology.org>%2F

Feedback:
We've uploaded a new Provisional Cell Ontology to BioPortal at https://bioportal.bioontology.org/ontologies/PCL<https://bioportal.bioontology.org/ontologies/PCL> , but when I try to find it using the search interface on the BioPortal home page, it doesn't appear in the dropdown list.

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