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[bioontology-support] API Access
mdorf at stanford.edu
Fri Feb 7 13:58:00 PST 2020
I am assuming you mean iterate over classes for a given ontology (parsing an ontology is an internal process and isn’t available via the REST service). To iterate over an ontology, you can call the “classes endpoint”, paging through the classes as you perform your custom logic on them. For example:
etc…until you get to the last page.
Hope this helps.
On Feb 7, 2020, at 1:46 PM, Rempel, Trevor <Trevor.Rempel at Point72.com<mailto:Trevor.Rempel at Point72.com>> wrote:
Thanks for getting back to me. I have been able to get an API key and have been looking through the API documentation, although I am having a bit of trouble trying to parse through a given ontology. Suppose I wanted to parse out the CPT ontology, how would I approach that?
From: Michael Dorf <mdorf at stanford.edu<mailto:mdorf at stanford.edu>>
Sent: Friday, February 7, 2020 4:44 PM
To: Rempel, Trevor <Trevor.Rempel at Point72.com<mailto:Trevor.Rempel at Point72.com>>
Cc: support at bioontology.org<mailto:support at bioontology.org>; Data Compliance <DataCompliance at Point72.com<mailto:DataCompliance at Point72.com>>
Subject: Re: [bioontology-support] API Access
To access our REST API, you’ll need an API key. The instructions for getting an API key are found on the BioPortal wiki:
Our REST API documentation is located here:
On Feb 6, 2020, at 3:43 PM, Rempel, Trevor <Trevor.Rempel at Point72.com<mailto:Trevor.Rempel at Point72.com>> wrote:
I was wondering if I could get access to your REST API? Thanks!
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