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[bioontology-support] Not able to use the ontology with the Annotator

Jennifer Leigh Vendetti vendetti at stanford.edu
Thu Jan 9 14:56:59 PST 2020


Hello Vipina,

Apologies for the inconvenience. An error occurred in our system on the initial attempt to process your ontology. 

I’ve reprocessed your submission, which is now fully available in BioPortal. I also confirmed that the Annotator includes your ontology in result sets.

Kind regards,
Jennifer



> On Jan 9, 2020, at 1:46 PM, Kuttichi Keloth, Vipina <vk396 at njit.edu> wrote:
> 
> Hi,
> 
> I had uploaded a new ontology (CIO_FirstEdition_Anchoring) on January 5th to BioPortal. I can view the classes but in the summary page next to the submission version it shows only Parsed and the metrics are not calculated (usually it shows  - Parsed, Indexed, Metrics, Annotator). 
> 
> Is this the reason why I am not able to use this ontology in the Annotator for annotating the text?
> I am able to select this ontology from the list of ontologies but annotation is not giving any results.
> 
> Could you please look into this?
> 
> Thank you.
> Vipina
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