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[bioontology-support] NCBO Annotator

Pranhav Sundararajan pranhav16 at gmail.com
Thu Nov 19 14:37:50 PST 2020


Hello,

The NCBO annotator sometimes annotates the same word multiple times, and I
was wondering if there would be any setting to have every word only be
annotated once?

Thank you

On Tue, Nov 17, 2020 at 6:14 PM Michael Dorf <mdorf at stanford.edu> wrote:

> Hi Pranhav,
>
> Thank you for contacting us. Please check out or REST sample code
> repository here:
>
> https://github.com/ncbo/ncbo_rest_sample_code
>
> The Annotator java example can be referenced from here:
>
>
> https://github.com/ncbo/ncbo_rest_sample_code/blob/master/java/src/AnnotateText.java
>
> Doing a quick Github search for “ncbo annotator” also yields a number of
> code sources that reference our Annotator REST API that you could adopt in
> your application:
>
> https://github.com/search?q=ncbo+annotator
>
> Hope this helps and you find the code you are looking for!
>
> Michael
>
>
> On Nov 17, 2020, at 9:25 AM, Pranhav Sundararajan <pranhav16 at gmail.com>
> wrote:
>
> Hello,
>
> I'm trying to use the NCBO Annotator in a program that will allow for
> multiple datasets and files to be annotated. Where can I find the code that
> will allow me to use the Annotator programmatically?
>
> Thank you
> _______________________________________________
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> bioontology-support at lists.stanford.edu
> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>
>
>
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