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[bioontology-support] SPARQL endpoint & federation

Samuel Rozé samuel.roze at birdie.care
Fri Oct 16 14:43:53 PDT 2020


Hi John,

That's fair enough, thank you for your reply. Would you mind guiding me
towards how you have done the Snomed -> RDF conversion and whether this is
open-source or not?

Thank you very much,
Samuel.

On Fri, 16 Oct 2020 at 19:57, John Graybeal <jgraybeal at stanford.edu> wrote:

> Samuel,
>
> Our apologies, the current SPARQL endpoint is a beta service, and it
> appears the mappings endpoint is down. We will try to bring it back up when
> we can, but I can't guarantee when that will be.
>
> John
>
> On Oct 14, 2020, at 2:44 PM, Samuel Rozé <samuel.roze at birdie.care> wrote:
>
> Hi there,
>
> First, thank you for exposing many APIs around health-care concepts &
> tools, this is a great contribution to the ecosystem. I have been trying to
> use your SPARQL endpoint
> <https://www.bioontology.org/wiki/SPARQL_BioPortal> in some prototype but
> I keep getting 403s from the endpoint:
>
> {"requestId":"e4ba9488-62bd-8696-ecb6-422668b079e1","code":"BadRequestException","detailedMessage":"The
> SERVICE call returned an unexpected HTTP result: 403, endpoint:
> http://sparql.bioontology.org/mappings/sparql/?apikey=0fc6a637-14ef-4d31-8691-ec13dc026d05
> "}
>
> This `apikey` is the one that I can find in my `sroze` account
> <https://bioportal.bioontology.org/accounts/sroze> unfortunately. Would
> you be able to guide me towards a reason? Are they different kind of API
> keys for this SPARQL endpoint?
>
> Thank you very much,
> Samuel.
>
> --
> <http://birdie.care/>
>
> *Samuel Rozé*
>
> VP of Engineering
> +447789932317
> 40 Islington High St
> <https://maps.google.com/?q=40+Islington+High+St+N1+8XB+London&entry=gmail&source=g>
> N1 8XB London
> <https://maps.google.com/?q=40+Islington+High+St+N1+8XB+London&entry=gmail&source=g>
>
> Birdie.care <http://birdie.care/> - Birdie, your digital care companion
> _______________________________________________
> bioontology-support mailing list
> bioontology-support at lists.stanford.edu
> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>
>
> ========================
> John Graybeal
> Technical Program Manager
> Center for Expanded Data Annotation and Retrieval /+/ NCBO BioPortal
> Stanford Center for Biomedical Informatics Research
> 650-736-1632  | ORCID  0000-0001-6875-5360
>
>
>
>

-- 
<http://birdie.care/>

*Samuel Rozé*

VP of Engineering
+447789932317
40 Islington High St
<https://maps.google.com/?q=40+Islington+High+St+N1+8XB+London&entry=gmail&source=g>
N1 8XB London
<https://maps.google.com/?q=40+Islington+High+St+N1+8XB+London&entry=gmail&source=g>

Birdie.care <http://birdie.care/> - Birdie, your digital care companion
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