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[bioontology-support] [BioPortal] Feedback from Karthik

Jennifer Leigh Vendetti vendetti at stanford.edu
Wed Aug 25 15:04:11 PDT 2021


Hello Karthik,

Apologies for this late reply.

We have a REST API that you could use to download the subclasses of the “cancer" class in the DOID ontology. The call would look something like the following:

https://data.bioontology.org/ontologies/DOID/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FDOID_162/children?display_links=false&display_context=false<https://data.bioontology.org/ontologies/DOID/classes/http://purl.obolibrary.org/obo/DOID_162/children?display_links=false&display_context=false>

The result set includes the IDs of each subclass (screenshot below). Our REST API is documented here:

http://data.bioontology.org/documentation

Instructions for getting an API key are here:

https://www.bioontology.org/wiki/BioPortal_Help#Getting_an_API_key

Let us know if you need further assistance.

Kind regards,
Jennifer



[cid:2787BD21-2687-4A9C-A2F2-4B1FE803D3B5 at lan]


On Aug 11, 2021, at 1:54 PM, support at bioontology.org<mailto:support at bioontology.org> wrote:

Hi,

I want to download all the instances of all the subclasses under the class "cancer" with their ID. Could you please explain how to do it.

Thanks

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