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[bioontology-support] [BioPortal] Feedback from Iris Liu

Liu Iris Iris.Liu at
Wed Mar 17 18:26:42 PDT 2021

Hi John,

Thanks for the speedy reply. I think I can still be able to search the relevant doc on google, so I suppose they are for public use? If not, I think I will think of other way to create my own list in the database, which will be pain.
WHO | World Health Organization<>
Classification : Language: Format: ICD-10 2019 version (including COVID-19 updates) English: ClaML : ICD-10 2019 version (including COVID-19 updates) English

International Classification of Diseases for Oncology, 3rd Edition (ICD-O-3) - WHO<>
Used principally in tumour or cancer registries for coding the site (topography) and the histology (morphology) of neoplasms, usually obtained from a pathology report. A multi-axial classification of the site, morphology, behaviour, and grading of neoplasms. The topography axis uses the ICD-10 ...

Warm regards,

Iris Liu

Research & Clinical Database Developer

Department of Health Services Research,

Department of Cancer Surgery and Anaesthetics,

Research Computing Facility, Office of Cancer Research

Peter MacCallum Cancer Centre

Phone  +61 3 8559 6814

Fax  +61 3 8559 5909
Email  Iris.Liu at<>


From: John Graybeal <jgraybeal at>
Sent: 18 March 2021 11:42
To: support at <support at>
Cc: Liu Iris <Iris.Liu at>
Subject: Re: [bioontology-support] [BioPortal] Feedback from Iris Liu

! EXTERNAL EMAIL: Think before you click. If suspicious send to CyberReport at

Hello Iris,

It appears these ontologies have been made private by the person who uploaded them to BioPortal. It is not clear that they are licensed by WHO for public use, so unless there is a source that can provide them publicly, we would not be able to put them in BioPortal ourselves.

Sorry we can't be more helpful.


On Mar 16, 2021, at 3:51 PM, support at<mailto:support at> wrote:

Name: Iris Liu

Email: iris.liu at<mailto:iris.liu at>



Hi there,
Hope you are well. Our study uses a research medical database which make reference to ontology in your website. We just discovered today that ICD-O-3-M and ICD-O-3-H no longer existed in your website, I'm just wondering whether this will be permeant or temporary. If it's temporary, may you let me know when this will be fixed?

Warm regards,

bioontology-support mailing list
bioontology-support at<mailto:bioontology-support at>

John Graybeal
Technical Program Manager
Center for Expanded Data Annotation and Retrieval /+/ NCBO BioPortal
Stanford Center for Biomedical Informatics Research
650-736-1632  | ORCID  0000-0001-6875-5360

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