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[bioontology-support] finding RXCUIs for a large list of medication names

Jennifer Leigh Vendetti vendetti at stanford.edu
Tue Sep 13 12:55:50 PDT 2022


Hi Richard,

I can try to help you with the API. I’m wondering if I could get a little more detail from you. Could you give me an example of a medication name? Also, do you know whether or not there’s a specific ontology that contains these RXCUI properties? Are you referring to the Drug Ontology?

Kind regards,
Jennifer


On Sep 13, 2022, at 12:22 PM, Eikstadt, Richard <eikstadt at med.umich.edu<mailto:eikstadt at med.umich.edu>> wrote:

Hello BioOntology help!
I hope you're doing well today!

I am attempting to find the RXCUIs for a number of medication names (in the 10s of thousands) and was hoping there was a way that I could 'feed' a list of medications into the portal and have returned to me a list of RXCuis for those medications.

Is this something that is possible?  I've tried reading the API notes, but am having trouble making heads or tails of where to begin.  I have written some Python and can install that on my local machine, but don't know where I'd go to next.

Thank you for any guidance you can provide!



Richard Eikstadt
Lead Data Architect
Pediatric Nephrology Clinical Research Program
ARF 2511B  /  MedSci I
Ann Arbor, MI 48109-0168
eikstadt at med.umich.edu<mailto:eikstadt at med.umich.edu>
(office) 936-5833
(cell) 734-787-6380<tel:(734)%20787-6380><tel:(734)%20787-6380>
https://www.kidneyresearchnetwork.org/


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