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</o:shapelayout></xml><![endif]--></head><body bgcolor=white lang=EN-US link=blue vlink=purple><div class=WordSection1><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'>yes I am sub setting it from UMLS but I am running a local instance of Bioportal on my machine. <o:p></o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'>How about the index folder? Within my subsets, like ICD-9,  under Meta folder I occasionally see Index folder next to Changes folder. Should I exclude that one as well? <o:p></o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'><o:p> </o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'>Thanks for the help<o:p></o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'>Sina<o:p></o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'><o:p> </o:p></span></p><div><div style='border:none;border-top:solid #B5C4DF 1.0pt;padding:3.0pt 0in 0in 0in'><p class=MsoNormal><b><span style='font-size:10.0pt;font-family:"Tahoma","sans-serif";color:windowtext'>From:</span></b><span style='font-size:10.0pt;font-family:"Tahoma","sans-serif";color:windowtext'> Kanjamala, Pradip P. [mailto:Kanjamala.Pradip@mayo.edu] <br><b>Sent:</b> Friday, December 03, 2010 2:19 PM<br><b>To:</b> Paul R Alexander; Madani,Sina<br><b>Cc:</b> support@bioontology.org<br><b>Subject:</b> RE: [bioontology-support] FW: BioPortal VM Image - access information<o:p></o:p></span></p></div></div><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif";color:blue'>Sina,</span><o:p></o:p></p><p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif";color:blue'>You would need to zip up all the RRF files excluding the CHANGES folder and submit it via the BioPortal UI. Often times the size gets to be too big for the upload and so I manually ftp the file over to the right location. </span><o:p></o:p></p><p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif";color:blue'>If you run into difficulties getting the load to work, please let me know the SAB you are interested in loading and I would help you get it into BioPortal. I assume you are subsetting the ontologies from the 2010AB version of the UMLS?</span><o:p></o:p></p><p class=MsoNormal> <o:p></o:p></p><p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif";color:blue'>Regards,</span><o:p></o:p></p><p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif";color:blue'>Pradip</span><o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><div class=MsoNormal align=center style='text-align:center'><hr size=2 width="100%" align=center></div><p class=MsoNormal style='margin-bottom:12.0pt'><b><span style='font-size:10.0pt;font-family:"Tahoma","sans-serif"'>From:</span></b><span style='font-size:10.0pt;font-family:"Tahoma","sans-serif"'> Paul R Alexander [mailto:palexander@stanford.edu] <br><b>Sent:</b> Friday, December 03, 2010 2:13 PM<br><b>To:</b> Madani,Sina<br><b>Cc:</b> support@bioontology.org; Kanjamala, Pradip P.<br><b>Subject:</b> Re: [bioontology-support] FW: BioPortal VM Image - access information</span><o:p></o:p></p><p class=MsoNormal>On 12/2/10 7:11 AM, Madani,Sina wrote: <o:p></o:p></p><div><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'>For RRF format terminologies, which RRF file I should use for upload (MRSAB, MRCONSO, or all of them)? For ICD9 below I just chose one and waiting for an error to happen. <br><br></span><o:p></o:p></p></div><p class=MsoNormal>Sina: My guess is that you would need to upload a zip archive containing all of the files, but I've CCed Pradip, our RRF expert, to see if he can shed some light for us.<br><br>Pradip, can you clarify this for Sina please?<br><br>Paul <o:p></o:p></p></div></body></html>