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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D">Hi Trish,<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D">I see the below defect was closed, will the fix be part of the upcoming bioportal release?<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"><o:p> </o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:black">Himanso Sahni<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"><a href="mailto:Himanso.Sahni@fda.hhs.gov">Himanso.Sahni@fda.hhs.gov</a><o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:black">Contractor-Recombinant By Deloitte<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"><a href="mailto:HSahni@recomdata.com">HSahni@recomdata.com</a><o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:black"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:black"><o:p> </o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"><o:p> </o:p></span></p>
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<p class="MsoNormal"><b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif"">From:</span></b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif""> Trish Whetzel [mailto:whetzel@stanford.edu]
<br>
<b>Sent:</b> Wednesday, January 16, 2013 9:27 PM<br>
<b>To:</b> Sahni, Himanso * (FDA)<br>
<b>Cc:</b> support@bioontology.org<br>
<b>Subject:</b> Re: [bioontology-support] OR search using RESTful API<o:p></o:p></span></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal">There appears to be a bug when trying to use OR with the Search API as the results returned appear to be the same as when using AND. This issue is now reported: <a href="https://bmir-gforge.stanford.edu/gf/project/ncbo/tracker/?action=TrackerItemEdit&tracker_item_id=4391&start=0">https://bmir-gforge.stanford.edu/gf/project/ncbo/tracker/?action=TrackerItemEdit&tracker_item_id=4391&start=0</a><o:p></o:p></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal">I am still reviewing examples of NOT with the Search API. <o:p></o:p></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal">Trish <o:p></o:p></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal">On Jan 14, 2013, at 8:00 PM, Sahni, Himanso * (FDA) wrote:<o:p></o:p></p>
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<p class="MsoNormal"><br>
<br>
<o:p></o:p></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif"">Hello,<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif"">Can you please provide an example of using the OR  or NOT operation as the current syntax at<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""><a href="http://www.bioontology.org/wiki/index.php/BioPortal_REST_services#Search_BioPortal">http://www.bioontology.org/wiki/index.php/BioPortal_REST_services#Search_BioPortal</a><o:p></o:p></span></p>
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<li class="MsoNormal" style="mso-list:l1 level1 lfo1"><b>Boolean Search Options:</b><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""><o:p></o:p></span></li></ul>
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<li class="MsoNormal" style="mso-list:l1 level2 lfo1">() parentheses allow to enclose multiple terms joined by OR<span style="font-size:11.0pt;font-family:"Calibri","sans-serif""><o:p></o:p></span></li></ul>
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<p class="MsoNormal" style="text-indent:-.25in"><span style="font-size:10.0pt;font-family:Wingdings"></span><span style="font-size:7.0pt"> <span class="apple-converted-space"> </span></span><span style="font-size:10.0pt;font-family:"Courier New"">Example:
 "(foo bar)" will expand to "foo* OR bar*"</span><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""><o:p></o:p></span></p>
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<li class="MsoNormal" style="mso-list:l2 level2 lfo2">- the minus sign preceding a term indicates NOT<span style="font-size:11.0pt;font-family:"Calibri","sans-serif""><o:p></o:p></span></li></ul>
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<p class="MsoNormal" style="text-indent:-.25in"><span style="font-size:10.0pt;font-family:Wingdings"></span><span style="font-size:7.0pt"> <span class="apple-converted-space"> </span></span><span style="font-size:10.0pt;font-family:"Courier New"">Example:
 "foo bar -baz" will expand to "foo* AND bar* AND NOT baz*"</span><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""><o:p></o:p></span></p>
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<li class="MsoNormal" style="mso-list:l0 level2 lfo3">No prefix means MUST (required).<span style="font-size:11.0pt;font-family:"Calibri","sans-serif""><o:p></o:p></span></li></ul>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""> <o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif"">does not work for me. If always return results of  an AND operation between the 2  terms<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""><a href="http://rest.bioontology.org/bioportal/search/?query=">rest.bioontology.org/bioportal/search/?query=</a>(LEG ARM)&apikey=<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""><a href="http://rest.bioontology.org/bioportal/search/?query=LEG">rest.bioontology.org/bioportal/search/?query=LEG</a><span class="apple-converted-space"> </span>-ARM&apikey=<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""><a href="http://rest.bioontology.org/bioportal/search/?query=LEG">rest.bioontology.org/bioportal/search/?query=LEG</a><span class="apple-converted-space"> </span>ARM&apikey=<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""> <o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif"">all return 260 results for where only both arm and leg are present<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""> <o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:black">Himanso Sahni</span><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""><o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""><a href="mailto:Himanso.Sahni@fda.hhs.gov">Himanso.Sahni@fda.hhs.gov</a><o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:black">Contractor-Recombinant Data Corp.</span><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""><o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""><a href="mailto:HSahni@recomdata.com">HSahni@recomdata.com</a><o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:black"> </span><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""><o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:black"> </span><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""><o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif""> <o:p></o:p></span></p>
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<p class="MsoNormal">_______________________________________________<br>
bioontology-support mailing list<br>
<a href="mailto:bioontology-support@lists.stanford.edu">bioontology-support@lists.stanford.edu</a><br>
<a href="https://mailman.stanford.edu/mailman/listinfo/bioontology-support">https://mailman.stanford.edu/mailman/listinfo/bioontology-support</a><o:p></o:p></p>
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