<html><head><meta http-equiv="Content-Type" content="text/html charset=iso-8859-1"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;">Neal,<div><br></div><div>You can use the following to get properties for FMA, which contain the FMAID:</div><div><a href="http://data.bioontology.org/ontologies/FMA/classes?include=prefLabel,properties&format=xml">http://data.bioontology.org/ontologies/FMA/classes?include=prefLabel,properties&format=xml</a></div><div><br></div><div>Paul</div><div><br></div><div><br><div><div>On Nov 1, 2013, at 7:12 PM, Maxwell Neal <<a href="mailto:mneal@u.washington.edu">mneal@u.washington.edu</a>> wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; ">Hi Manuel,<div><br></div><div>I have a question similar to Carlos's:</div><div><br></div><div>I'm trying to use the BioPortal REST services to search over the FMA and I want the results (formatted in xml) to include the FMAID property associated with each term. I haven't been able to determine the right incantation and would appreciate some help.</div><div><br></div><div>Thanks!</div><div><br></div><div>M</div><div><br><div>
<span class="Apple-style-span" style="border-collapse: separate; font-family: Helvetica; border-spacing: 0px; font-size: inherit;"><span class="Apple-style-span" style="border-collapse: separate; font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; border-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-stroke-width: 0px; font-size: inherit;"><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><span class="Apple-style-span" style="border-collapse: separate; font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; border-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-stroke-width: 0px; font-size: inherit;"><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><span class="Apple-style-span" style="border-collapse: separate; font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; border-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-stroke-width: 0px; font-size: inherit;"><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><span class="Apple-style-span" style="border-collapse: separate; font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; border-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-stroke-width: 0px; font-size: inherit;"><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><span class="Apple-style-span" style="border-collapse: separate; font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; border-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-stroke-width: 0px; font-size: inherit;"><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div>---------------------------------</div><div>Maxwell Neal</div><div><br></div><div>Post-doctoral researcher</div><div>Department of Bioengineering</div><div>University of Washington</div><div><a href="mailto:mneal@uw.edu">mneal@uw.edu</a></div><div>---------------------------------</div><div><br></div></div></span><br class="Apple-interchange-newline"></div></span><br class="Apple-interchange-newline"></div></span><br class="Apple-interchange-newline"></div></span><br class="Apple-interchange-newline"></div></span><br class="Apple-interchange-newline"></span><br class="Apple-interchange-newline">
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<br><div><div>On Nov 1, 2013, at 6:46 PM, manuelso wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><meta http-equiv="Content-Type" content="text/html charset=iso-8859-1"><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;">Hi Carlos,<div><br></div><div>The default REST class call does not return all the properties attached to a term. If you want to see all properties you can add the following parameter to your call:</div><div><br></div><div>?include=prefLabel,synonyms,definitions,properties</div><div><br></div><div>something like this would work:</div><div><br></div><div><a href="http://data.bioontology.org/ontologies/MEDLINEPLUS/classes/http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FMEDLINEPLUS%2F31?include=prefLabel,synonyms,definitions,properties">http://data.bioontology.org/ontologies/MEDLINEPLUS/classes/http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FMEDLINEPLUS%2F31?include=prefLabel,synonyms,definitions,properties</a></div><div><br></div><div>Manuel</div><div><br></div><div><br></div><div><div><div>On Nov 1, 2013, at 6:14 PM, Carlos Luis Sánchez Bocanegra <<a href="mailto:carlosl.sanchez@gmail.com">carlosl.sanchez@gmail.com</a>> wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><div dir="ltr">Hi everyone,<div><br></div><div>I´m diving on the bioontology REST API, try to exploit all their possibilities including on this API.</div><div><br></div><div>I take some time to adapt and get manual results and finally I think I can manage with the API. I need to access to the <span style="color:rgb(102,102,153);font-family:'Lucida Sans Unicode','Lucida Grande',sans-serif;font-size:12px;line-height:14px">MP_HEALTH_TOPIC_URL value on the Class Medicine (for example) </span><font color="#666699" face="Lucida Sans Unicode, Lucida Grande, sans-serif"><span style="font-size:12px;line-height:14px"><a href="http://bioportal.bioontology.org/ontologies/MEDLINEPLUS?p=classes&conceptid=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FMEDLINEPLUS%2F31#details">http://bioportal.bioontology.org/ontologies/MEDLINEPLUS?p=classes&conceptid=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FMEDLINEPLUS%2F31#details</a></span></font></div>

<div><font color="#666699" face="Lucida Sans Unicode, Lucida Grande, sans-serif"><span style="font-size:12px;line-height:14px"><br></span></font></div><div><font color="#666699" face="Lucida Sans Unicode, Lucida Grande, sans-serif"><span style="font-size:12px;line-height:14px">But REST API does not give me this value: </span></font><a href="http://data.bioontology.org/ontologies/MEDLINEPLUS/classes/http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FMEDLINEPLUS%2F31" title="Link: http://data.bioontology.org/ontologies/MEDLINEPLUS/classes/http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FMEDLINEPLUS%2F31" style="background-color:transparent;font-family:monaco,monospace;font-size:12px;line-height:21px;white-space:pre-line;margin:0px;padding:2px 0px;vertical-align:baseline;color:rgb(28,92,118);word-wrap:break-word">http://data.bioontology.org/ontologies/MEDLINEPLUS/classes/http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FMEDLINEPLUS%2F31</a><span style="background-color:transparent;color:rgb(51,51,51);font-family:monaco,monospace;font-size:12px;line-height:21px;white-space:pre-line"> : </span><a href="http://purl.bioontology.org/ontology/MEDLINEPLUS/31" title="Link: http://purl.bioontology.org/ontology/MEDLINEPLUS/31" style="background-color:transparent;font-family:monaco,monospace;font-size:12px;line-height:21px;white-space:pre-line;margin:0px;padding:2px 0px;vertical-align:baseline;color:rgb(28,92,118);outline:none;word-wrap:break-word">http://purl.bioontology.org/ontology/MEDLINEPLUS/31</a></div>

<div><br></div><div>In the rest result I can´t find MP_HEALTH_TOPIC_URL.</div><div><br></div><div>Thank your for helping me.</div><div><br></div><div>C.</div></div>
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