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<div>Ray,</div>
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<div>Please, do apologize the impatience, BioPortal is a phenomenal resource.  In the case of a new revision, could the system email a notification the Ontology has been parsed or not?<br>
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Caty</div>
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On Nov 20, 2014, at 4:59 PM, "Ray Fergerson" <<a href="mailto:ray.fergerson@stanford.edu">ray.fergerson@stanford.edu</a>> wrote:<br>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D">Caty,<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D">We pick up the “load from URL” ontologies nightly. Thus a one day delay is to be expected.<o:p></o:p></span></p>
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Ray<o:p></o:p></span></p>
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<p class="MsoNormal"><b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif"">From:</span></b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif""> Chung, Caty Elizabeth [<a href="mailto:c.chung@med.miami.edu">mailto:c.chung@med.miami.edu</a>]
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<b>Sent:</b> Thursday, November 20, 2014 7:25 AM<br>
<b>To:</b> Ray Fergerson; <a href="mailto:support@bioontology.org">support@bioontology.org</a><br>
<b>Cc:</b> Stephan Schurer PhD<br>
<b>Subject:</b> Re: [bioontology-support] BioAssay Ontology<o:p></o:p></span></p>
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<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black">Hi Ray,<o:p></o:p></span></p>
<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black">Looks great!  The downloads are working fine too.<o:p></o:p></span></p>
<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black"><a href="http://bioportal.bioontology.org/ontologies/BAO" id="lnk712337">http://bioportal.bioontology.org/ontologies/BAO</a>​<o:p></o:p></span></p>
<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black">Thanks,<o:p></o:p></span></p>
<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black">Caty<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:white"><b><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:black">From:</span></b><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:black"> Chung, Caty Elizabeth<br>
<b>Sent:</b> Wednesday, November 19, 2014 12:36 PM<br>
<b>To:</b> Ray Fergerson; <a href="mailto:support@bioontology.org">support@bioontology.org</a><br>
<b>Cc:</b> Stephan Schurer PhD<br>
<b>Subject:</b> Re: [bioontology-support] BioAssay Ontology</span><span style="font-family:"Calibri","sans-serif";color:#212121">
<o:p></o:p></span></p>
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<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black">​Hi Ray,<o:p></o:p></span></p>
<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black">In BioPortal the setting selection is "</span><span style="font-family:"Trebuchet MS","sans-serif";color:black">Load from URL  </span><span style="font-size:8.5pt;font-family:"Trebuchet MS","sans-serif";color:black">(new
 versions loaded daily)"</span><span style="font-family:"Calibri","sans-serif";color:black"><o:p></o:p></span></p>
<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black;background:white">Yesterday before noon, we released BAO revision 2986.  BioPortal does not seem to pick up BAO.  ​</span><span style="font-family:"Calibri","sans-serif";color:black"><o:p></o:p></span></p>
<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black">Should I submit manually?<o:p></o:p></span></p>
<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black">Caty<o:p></o:p></span></p>
<pre style="background:white;word-wrap:break-word;white-space:pre-wrap"><span style="color:black">        <rdfs:comment>Release date: November 18, 2014</rdfs:comment><o:p></o:p></span></pre>
<pre style="background:white"><span style="color:black">        <rdfs:comment>svn:  2986</rdfs:comment><o:p></o:p></span></pre>
<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black"><o:p> </o:p></span></p>
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<p class="MsoNormal" style="background:white"><b><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:black">From:</span></b><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:black"> Ray Fergerson <<a href="mailto:ray.fergerson@stanford.edu">ray.fergerson@stanford.edu</a>><br>
<b>Sent:</b> Tuesday, November 11, 2014 7:17 PM<br>
<b>To:</b> Chung, Caty Elizabeth; <a href="mailto:support@bioontology.org">support@bioontology.org</a><br>
<b>Cc:</b> Stephan Schurer PhD<br>
<b>Subject:</b> RE: [bioontology-support] BioAssay Ontology</span><span style="font-family:"Calibri","sans-serif";color:#212121">
<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:white"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D">Please have a look at BAO now and let us know if you think that it needs to be changed. It appears that the most recent load has worked
 correctly.</span><span style="color:#212121"><o:p></o:p></span></p>
<p class="MsoNormal" style="background:white"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"> </span><span style="color:#212121"><o:p></o:p></span></p>
<p class="MsoNormal" style="background:white"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D">Ray</span><span style="color:#212121"><o:p></o:p></span></p>
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<p class="MsoNormal" style="background:white"><b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif";color:#212121">From:</span></b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif";color:#212121"> bioontology-support [<a href="mailto:bioontology-support-bounces@lists.stanford.edu">mailto:bioontology-support-bounces@lists.stanford.edu</a>]
<b>On Behalf Of </b>Chung, Caty Elizabeth<br>
<b>Sent:</b> Saturday, November 1, 2014 5:35 AM<br>
<b>To:</b> <a href="mailto:support@bioontology.org">support@bioontology.org</a><br>
<b>Cc:</b> 'Stephan Schurer PhD'<br>
<b>Subject:</b> [bioontology-support] BioAssay Ontology</span><span style="color:#212121"><o:p></o:p></span></p>
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<p class="MsoNormal" style="background:white"><span style="color:#212121"> <o:p></o:p></span></p>
<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black">Hello,</span><span style="font-family:"Calibri","sans-serif";color:#212121"><o:p></o:p></span></p>
<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black"> </span><span style="font-family:"Calibri","sans-serif";color:#212121"><o:p></o:p></span></p>
<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black">Yesterday roughly 2 pm EST, we published on our site a new version of BAO.  Roughly 8 am EST I checked, did not see it updated on BioPortal.  I uploaded the file and I
 pointed to our site.  It seems that pointing to our site is not working.  <a href="http://www.bioassayontology.org/bao/bao_complete.owl" id="lnk171171">http://www.bioassayontology.org/bao/bao_complete.owl</a></span><span style="font-family:"Calibri","sans-serif";color:#212121"><o:p></o:p></span></p>
<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black"> </span><span style="font-family:"Calibri","sans-serif";color:#212121"><o:p></o:p></span></p>
<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black">Now I see two lines, one breaks the other one works.  Sorry!  Can you clean up the for my mistake?</span><span style="font-family:"Calibri","sans-serif";color:#212121"><o:p></o:p></span></p>
<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black"> </span><span style="font-family:"Calibri","sans-serif";color:#212121"><o:p></o:p></span></p>
<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black"><a href="http://bioportal.bioontology.org/ontologies/BAO" id="lnk80178">http://bioportal.bioontology.org/ontologies/BAO</a></span><span style="font-family:"Calibri","sans-serif";color:#212121"><o:p></o:p></span></p>
<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black"> </span><span style="font-family:"Calibri","sans-serif";color:#212121"><o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-family:"Trebuchet MS","sans-serif"">2.0 </span><span class="ontologysubmissionstatus"><span style="font-size:10.0pt;font-family:"Trebuchet MS","sans-serif";color:gray">(Uploaded)</span></span><o:p></o:p></p>
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<p class="MsoNormal"><span style="font-family:"Trebuchet MS","sans-serif"">04/25/2014</span><o:p></o:p></p>
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<p class="MsoNormal"><span style="font-family:"Trebuchet MS","sans-serif"">11/01/2014</span><o:p></o:p></p>
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<p class="MsoNormal"><span style="font-family:"Trebuchet MS","sans-serif""><a href="http://data.bioontology.org/ontologies/BAO/submissions/22/download?apikey=4ea81d74-8960-4525-810b-fa1baab576ff"><span style="color:#234979">OWL</span></a></span><o:p></o:p></p>
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<p style="background:white"><span style="font-family:"Calibri","sans-serif";color:black">Caty</span><span style="font-family:"Calibri","sans-serif";color:#212121"><o:p></o:p></span></p>
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