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Hi Marci,
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<div class="">On Aug 17, 2017, at 11:32 AM, Marci Bowen <<a href="mailto:marcia.bowen@duke.edu" class="">marcia.bowen@duke.edu</a>> wrote:</div>
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Thank you. I am so confused. 
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<div class="">How do I get access to the REST API?</div>
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<div>The BioPortal REST API is freely available. The only step required for use is to create an account on the BioPortal website, which will generate an API key for you. Instructions for creating an account, and accessing your resulting API key are available
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<div><a href="https://www.bioontology.org/wiki/index.php/BioPortal_Help#Getting_an_API_key" class="">https://www.bioontology.org/wiki/index.php/BioPortal_Help#Getting_an_API_key</a></div>
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<div>Once you have your API key, you include it as a parameter every time you issue a REST API call. For example, you could enter the following URL in a browser to see a list of all the ontologies available in BioPortal:</div>
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<div><font color="#0069d9" class=""><u class=""><a href="http://data.bioontology.org/ontologies?apikey=your_api_key_here" class="">http://data.bioontology.org/ontologies?apikey=your_api_key_here</a></u></font></div>
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<div>Kind regards,</div>
<div>Jennifer</div>
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<div class="">Thanks,</div>
<div class="">Marci Bowen</div>
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<div class="">On Aug 17, 2017, at 2:28 PM, Jennifer Leigh Vendetti <<a href="mailto:vendetti@stanford.edu" class="">vendetti@stanford.edu</a>> wrote:</div>
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Hello Marci,
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<div class="">On Aug 16, 2017, at 4:12 PM, Marci Bowen <<a href="mailto:marcia.bowen@duke.edu" class="">marcia.bowen@duke.edu</a>> wrote:</div>
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I use Firefox. I cleared the cache and that corrected the problem.
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<div class="">Now, how I can I download the SNOMED code and description of all the decedents that result from searching.</div>
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<div class="">Due to licensing restrictions, we’re unable to provide the SNOMED ontology as a file download. You can however, access SNOMED data via our REST API.  For example, to retrieve the descendants of the “Seizure” term, you can use this call:</div>
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<div class=""><a href="https://urldefense.proofpoint.com/v2/url?u=http-3A__data.bioontology.org_ontologies_SNOMEDCT_classes_http-3A__purl.bioontology.org_ontology_SNOMEDCT_91175000_descendants&d=DwMGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=_XpVTJrtr0X0leljtIDRlyodLng6oKbmgmLrhWmENRA&m=ySAnM_cDRyR62IMrSkXjAa_Js5yhQOBJUEq4agCFGNg&s=g_U3sCeXIwCrTR9QbxEJjlZ0vw-AKzKZ4KgRVVgI6KA&e=" class="">http://data.bioontology.org/ontologies/SNOMEDCT/classes/http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FSNOMEDCT%2F91175000/descendants</a></div>
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<div class="">I don’t know what property you’re referring to when you say “code”. You can use the BioPortal user interface to look at the properties and their associated values for any class:</div>
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<div class=""><span id="cid:4B1C4D28-57CB-49BD-87DC-713F36DFCF9A@stanford.edu" class=""><Screenshot 2017-08-17 11.15.50.png></span></div>
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<div class="">I don’t see any properties on the right-hand side that are called code or definition. If you can’t find what you’re looking for in BioPortal, you might consider getting a UMLS license (free and easy), and try out the web-based browser that they
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<div class=""><span id="cid:CA44E871-4794-4B2B-9549-178F9086A91F@stanford.edu" class=""><Screenshot 2017-08-17 11.20.08.png></span></div>
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<div class="">Can I also download the hierarchy? In this case, I searched seizure.</div>
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<div class="">Yes, this is possible from the REST endpoint. You may want to look at the tree and/or paths_to_root calls:</div>
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<div class=""><a href="https://urldefense.proofpoint.com/v2/url?u=http-3A__data.bioontology.org_ontologies_SNOMEDCT_classes_http-3A__purl.bioontology.org_ontology_SNOMEDCT_91175000_tree&d=DwMGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=_XpVTJrtr0X0leljtIDRlyodLng6oKbmgmLrhWmENRA&m=ySAnM_cDRyR62IMrSkXjAa_Js5yhQOBJUEq4agCFGNg&s=dEy4a47Jshg2pIgjNDhbwYmZng8UBSQf_GccerZzt88&e=" class="">http://data.bioontology.org/ontologies/SNOMEDCT/classes/http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FSNOMEDCT%2F91175000/tree</a></div>
<div class=""><a href="https://urldefense.proofpoint.com/v2/url?u=http-3A__data.bioontology.org_ontologies_SNOMEDCT_classes_http-3A__purl.bioontology.org_ontology_SNOMEDCT_91175000_paths-5Fto-5Froot&d=DwMGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=_XpVTJrtr0X0leljtIDRlyodLng6oKbmgmLrhWmENRA&m=ySAnM_cDRyR62IMrSkXjAa_Js5yhQOBJUEq4agCFGNg&s=fCs7Xm2O-shyBBWYl_LQoxhd6UpXGQ77vtnK-dxEAkw&e=" class="">http://data.bioontology.org/ontologies/SNOMEDCT/classes/http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FSNOMEDCT%2F91175000/paths_to_root</a></div>
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<div class="">The REST API documentation is here:</div>
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<div class=""><a href="https://urldefense.proofpoint.com/v2/url?u=http-3A__data.bioontology.org_documentation-23nav-5Fhome&d=DwMGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=_XpVTJrtr0X0leljtIDRlyodLng6oKbmgmLrhWmENRA&m=ySAnM_cDRyR62IMrSkXjAa_Js5yhQOBJUEq4agCFGNg&s=vh159AU2b-v85p3oYeh9K5GWQ_q_lRpYB-5gFxUHhg4&e=" class="">http://data.bioontology.org/documentation#nav_home</a></div>
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<div class="">Kind regards,</div>
<div class="">Jennifer</div>
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<div class="">Thanks,</div>
<div class="">Marci</div>
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<div class="">On Aug 16, 2017, at 19:01, Jennifer Leigh Vendetti <<a href="mailto:vendetti@stanford.edu" class="">vendetti@stanford.edu</a>> wrote:</div>
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Hi Marci,
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<div class="">I’m wondering if you could try clearing your browser cache? I’m not sure what browser you’re using. To clear the cache in Chrome, you’d select the menu item “Chrome” -> “Clear Browsing Data…” and follow the instructions in the resulting dialog.</div>
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<div class="">Kind regards,</div>
<div class="">Jennifer</div>
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<div class="">On Aug 16, 2017, at 1:27 PM, Marci Bowen <<a href="mailto:marcia.bowen@duke.edu" class="">marcia.bowen@duke.edu</a>> wrote:</div>
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This is what I am doing:
<div class="">after I log in, under tools, I select "Ontology Browser”. then I select blue highlighted "SNOMED CT”, I get this error:</div>
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<h1 class="">We're sorry but something has gone wrong. We have been notified of this error.</h1>
<div class="">So I then have to go back and select classes. I type in Seziure in the jump to: box.</div>
<div class="">Then I get :</div>
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<h1 class="">We're sorry but something has gone wrong. We have been notified of this error.</h1>
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<div class="">I just want to get a report of all the SNOMED codes and descriptions that a search for seizure gets.</div>
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<div class="">Thanks,</div>
<div class="">Marci </div>
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<div class="">PS My phone number is 828.408.2434 if you would prefer to call.</div>
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Hi Marcia,
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<div class="">Could you give me an example of the term you’re searching for? Are you using any of the advanced search options? Which browser are you using?</div>
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<div class="">Also, do you mean that search is only working for you when you’re logged out?</div>
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<div class="">Kind regards,</div>
<div class="">Jennifer</div>
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<div class="">On Aug 16, 2017, at 1:09 PM, <a href="mailto:support@bioontology.org" class="">
support@bioontology.org</a> wrote:</div>
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<p class="">Name: marcibowen </p>
<p class="">Email: <a href="mailto:marcia.bowen@duke.edu" class="">marcia.bowen@duke.edu</a>
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<p class="">Location: https%3A%2F%<a href="https://urldefense.proofpoint.com/v2/url?u=http-3A__2Fbioportal.bioontology.org&d=DwMGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=_XpVTJrtr0X0leljtIDRlyodLng6oKbmgmLrhWmENRA&m=tljDhJ_diA57oSMHRCNdxMYjIdUGsv8R7MxBMW0SJ4g&s=zfnSclPJVkTpgFBaRPSgf6oRmLB2h1Q1M7zotZd7TR0&e=" class="">2Fbioportal.bioontology.org</a>%2F500
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<strong class="">Feedback:</strong> </p>
<p class="">I desperately need your help. I keep getting : <br class="">
We're sorry but something has gone wrong. We have been notified of this error.</p>
<p class="">When I try to search after I log in. What do I need to do?</p>
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