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Lynn,
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<div class="">It looks like the new ontology is parsed, has the new metrics, and produces the new values.
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<div class="">Can you have a look and let me know if anything seems amiss?</div>
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<div class="">Also, if you can drop me a line when the next update happens, or just check BioPortal the next day and see if it has updated correctly, I'd appreciate it.</div>
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<div class="">Thanks for checking up on BioPortal, appreciate it!</div>
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<div class="">John<br class="">
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<div class="">On Nov 16, 2020, at 12:12 PM, Schriml, Lynn <<a href="mailto:lschriml@som.umaryland.edu" class="">lschriml@som.umaryland.edu</a>> wrote:</div>
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Hello John,</div>
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Either is fine with me. </div>
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Much appreciated !!</div>
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Cheers,</div>
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Lynn</div>
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<font face="Calibri, sans-serif" style="font-size: 11pt;" class=""><b class="">From:</b><span class="Apple-converted-space"> </span>John Graybeal <<a href="mailto:jgraybeal@stanford.edu" class="">jgraybeal@stanford.edu</a>><br class="">
<b class="">Sent:</b><span class="Apple-converted-space"> </span>Monday, November 16, 2020 1:39 PM<br class="">
<b class="">To:</b><span class="Apple-converted-space"> </span>NCBO User Support <<a href="mailto:support@bioontology.org" class="">support@bioontology.org</a>><br class="">
<b class="">Cc:</b><span class="Apple-converted-space"> </span>Schriml, Lynn <<a href="mailto:lschriml@som.umaryland.edu" class="">lschriml@som.umaryland.edu</a>><br class="">
<b class="">Subject:</b><span class="Apple-converted-space"> </span>Re: [bioontology-support] [BioPortal] Feedback from Lynn Schriml</font>
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Lynn,
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<div class="">can you give us the IRI that you want us to use?  I would expect it's either of these:</div>
<div class="">- <a href="https://nam11.safelinks.protection.outlook.com/?url=https%3A%2F%2Fraw.githubusercontent.com%2FDiseaseOntology%2FHumanDiseaseOntology%2Fmain%2Fsrc%2Fontology%2Fdoid.owl&data=04%7C01%7Clschriml%40som.umaryland.edu%7C3b9b196b85d44ae8f7a508d88a5efa58%7C717009a620de461a88940312a395cac9%7C0%7C0%7C637411488407341773%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C2000&sdata=liIAavpF9B0D0Dga%2Fgsl%2FnlF5PGYR332cvhzPuDpluo%3D&reserved=0" originalsrc="https://raw.githubusercontent.com/DiseaseOntology/HumanDiseaseOntology/main/src/ontology/doid.owl" shash="rFqYhnqihZuzIz9s7apDMUtfdbPZiIG+k9PGVUPyol26UBqF2tJWujt6bI/Tg0kO6lAXmP0DSPs14m/Bbkg0ZxvBL3nj1PHBMK31FZtQ6uNQToedvhcxpHUGS8OpjxE2T1Uicv3hzUdGa9cq3xFT9uxbP+bY9Ef866TpjLNRCcM=" class="">https://raw.githubusercontent.com/DiseaseOntology/HumanDiseaseOntology/main/src/ontology/doid.owl</a></div>
<div class="">- <span class="" style="orphans: 2; white-space: pre-wrap; widows: 2;"><a href="https://nam11.safelinks.protection.outlook.com/?url=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2Fdoid.owl&data=04%7C01%7Clschriml%40som.umaryland.edu%7C3b9b196b85d44ae8f7a508d88a5efa58%7C717009a620de461a88940312a395cac9%7C0%7C0%7C637411488407341773%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C2000&sdata=DvtjMd75KVkbQDvEGCewJ1N%2B3b%2F7JPZuSbSBhnB33bw%3D&reserved=0" originalsrc="http://purl.obolibrary.org/obo/doid.owl" shash="cCahhFUtzD85EEdyS+CMX2JqMXccKP6INcyXNtpSOfnk+heigS4pG7mCc4tKNOtQ73rVaGIgFZifiE4BILUzKum0TJeneZdjf4Wkjx72C3ECx3PRezaHvn22B3UzuBE0swDINhxjhyyYT9iClE2PMCnY/t8yMXiKaJReTJrK2Vc=" class="">http://purl.obolibrary.org/obo/doid.owl</a></span>
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<div class="">It appears we may have been configured to use the first one, but with 'master' in the IRI instead of 'main'.</div>
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<div class="">I'm also taking the liberty of updating the Homepage and Documentation metadata.</div>
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<div class="">John</div>
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<div class="">On Nov 13, 2020, at 3:22 PM,<span class="Apple-converted-space"> </span><a href="mailto:support@bioontology.org" class="">support@bioontology.org</a><span class="Apple-converted-space"> </span>wrote:</div>
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<div style="margin-top: 0px; margin-bottom: 0px;" class="">Name: Lynn Schriml<span class="Apple-converted-space"> </span></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><a href="mailto:lschriml@som.umaryland.edu" class="">Email: lschriml@som.umaryland.edu</a></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class="">Location: http%3A%2F%<a href="https://nam11.safelinks.protection.outlook.com/?url=http%3A%2F%2F2fbioportal.bioontology.org%2F&data=04%7C01%7Clschriml%40som.umaryland.edu%7C3b9b196b85d44ae8f7a508d88a5efa58%7C717009a620de461a88940312a395cac9%7C0%7C0%7C637411488407351771%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C2000&sdata=mOkkuyD2BymZ6I8uV06LsHMd1LabQh8pZJLfZc1vGpY%3D&reserved=0" originalsrc="http://2fbioportal.bioontology.org/" shash="bVqehybIVw5QW4v+juVvjNipljDAQl8z2qdus5Vp3vBcPMn1KgBiL/3sYsPJ1OEvUdS7YxwJeQc9h1+Ed1h+83B5jTRwxkWJdxpcy0ZlJxGrVa9iT3vDAlDN4J79A2MNOALgxujMNRy2xqOeSYGd7tODbTfo4LM9fSzmv67gHOk=" class="">2Fbioportal.bioontology.org</a>%2Fontologies%2FDOID</div>
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<strong class="">Feedback:</strong></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class="">Hello, I noticed that the Human Disease Ontology has not been updated in the Bioportal since 2018. We update the DO’s GitHub releases at least once a month.<span class="Apple-converted-space"> </span><br class="">
Is there a problem with the ontology file ?<span class="Apple-converted-space"> </span><br class="">
Thank you,<span class="Apple-converted-space"> </span><br class="">
Lynn Schriml<span class="Apple-converted-space"> </span><br class="">
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PI Human Disease Ontology</div>
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<div class="">John Graybeal</div>
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<div class="">Stanford Center for Biomedical Informatics Research<br class="">
650-736-1632  | ORCID  0000-0001-6875-5360</div>
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<div class="">John Graybeal</div>
<div class="">Technical Program Manager</div>
<div class="">Center for Expanded Data Annotation and Retrieval /+/ NCBO BioPortal</div>
<div class="">Stanford Center for Biomedical Informatics Research<br class="">
650-736-1632  | ORCID  0000-0001-6875-5360</div>
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