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[farmshare-discuss] Help installing gputools on Rye

Bradley Spahn bradleyspahn at gmail.com
Tue Nov 12 01:05:14 PST 2013


I ended up getting it to work by loading the cuda module first, but I'll
try your suggestion as well if it comes up in the future.

Thanks!


On Mon, Nov 11, 2013 at 10:29 PM, Jason Bishop <bishopj at stanford.edu> wrote:

>
> Hi Bradley, Try with --library flag and I think it will go through.  There
> is an example here
> https://www.stanford.edu/group/farmshare/cgi-bin/wiki/index.php/HierRegressions
>
> Jason
>
>
> ----- Original Message -----
> From: "Bradley Spahn" <bradleyspahn at gmail.com>
> To: "Open discussion for users of FarmShare" <
> farmshare-discuss at lists.stanford.edu>
> Sent: Monday, November 11, 2013 5:26:43 PM
> Subject: [farmshare-discuss] Help installing gputools on Rye
>
> Hi all,
>
> I'm trying to install the gputools package on Rye, but am running into
> some trouble. Has anyone had success with this? Here's what I'm doing:
>
> # Download v0.26 of gputools, since later releases don't support R 2.15.2
> wget
> http://cran.r-project.org/src/contrib/Archive/gputools/gputools_0.26.tar.gz
> tar xf gputools_0.26.tar.gz
> NVCC_OPT="-arch compute_20" R CMD build gputools && R CMD INSTALL
> gputools_0.26.tar.gz
>
>
> I also tried this:
> R CMD build gputools && R CMD INSTALL gputools_0.26.tar.gz
>
> But it also failed. Any suggestions?
>
>
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