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allergene annotation

Jane Lomax jane at ebi.ac.uk
Tue Mar 14 05:50:36 PST 2006


We could add a new term for this actually, as a child of interaction
bewteen organisms:

interaction between organisms ; GO:0051704
---[i] physiological interaction between organisms ; GO:0051706
------[i] induction of immune response in other organism ; GO:new
---------[i] induction of hypersensitive response in other organism ; 
GO:new

etc.

Don't use GO:0016068 (type I hypersensitivity) because that term
describes the process in the organism reacting to the allergen.

thanks,

jane


Dr Jane Lomax
GO Editorial Office
EMBL-EBI
Wellcome Trust Genome Campus
Hinxton
Cambridgeshire, UK
CB10 1SD

p: +44 1223 492516
f: +44 1223 494468


On Tue, 14 Mar 2006 adepto at cribi.unipd.it wrote:

> Hi All
> I have to annotate plant genes described as "allergenic peptides" in pFam these
> genes are described as:
> "Allergies are hypersensitivity reactions of the immune system to specific
> substances called allergens (such as pollen, stings, drugs, or food) that, in
> most people, result in no symptoms. A nomenclature system has been established
> for antigens (allergens) that cause IgE-mediated atopic allergies in humans..."
> 
> So, where may I annotate these allergenes? It is GO:0016068 (type I
> hypersensitivity) the right term? 
> Thanks in advance.
> Alessandro
> 




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